Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.21■□□□□ 0.51
TAF4O00268 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TAF4O00268 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TAF4O00268 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.21■□□□□ 0.51
TAF4O00268 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TAF4O00268 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TAF4O00268 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TAF4O00268 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TAF4O00268 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.21■□□□□ 0.51
TAF4O00268 FAM220CP-201ENST00000395253 831 ntBASIC18.21■□□□□ 0.51
TAF4O00268 MRPL3P1-201ENST00000400109 1033 ntBASIC18.21■□□□□ 0.51
TAF4O00268 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.21■□□□□ 0.51
TAF4O00268 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.21■□□□□ 0.51
TAF4O00268 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TAF4O00268 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
TAF4O00268 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.21■□□□□ 0.51
TAF4O00268 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.21■□□□□ 0.51
TAF4O00268 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
TAF4O00268 AC005332.7-201ENST00000614046 2005 ntBASIC18.21■□□□□ 0.51
TAF4O00268 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TAF4O00268 KRT8P8-201ENST00000434750 1448 ntBASIC18.21■□□□□ 0.51
TAF4O00268 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TAF4O00268 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TAF4O00268 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TAF4O00268 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TAF4O00268 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TAF4O00268 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.21■□□□□ 0.51
TAF4O00268 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TAF4O00268 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.2■□□□□ 0.5
TAF4O00268 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TAF4O00268 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TAF4O00268 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TAF4O00268 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TAF4O00268 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TAF4O00268 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TAF4O00268 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TAF4O00268 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.2■□□□□ 0.5
TAF4O00268 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TAF4O00268 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.2■□□□□ 0.5
TAF4O00268 BX276092.5-203ENST00000456199 560 ntBASIC18.2■□□□□ 0.5
TAF4O00268 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TAF4O00268 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.2■□□□□ 0.5
TAF4O00268 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.2■□□□□ 0.5
TAF4O00268 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.2■□□□□ 0.5
TAF4O00268 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
TAF4O00268 NEK4P2-201ENST00000580004 1012 ntBASIC18.2■□□□□ 0.5
TAF4O00268 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.2■□□□□ 0.5
TAF4O00268 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.2■□□□□ 0.5
TAF4O00268 AP002414.4-201ENST00000589764 1148 ntBASIC18.2■□□□□ 0.5
TAF4O00268 AC011498.5-201ENST00000592027 486 ntBASIC18.2■□□□□ 0.5
TAF4O00268 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TAF4O00268 AL121672.3-201ENST00000608644 468 ntBASIC18.2■□□□□ 0.5
TAF4O00268 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.2■□□□□ 0.5
TAF4O00268 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TAF4O00268 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TAF4O00268 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.2■□□□□ 0.5
TAF4O00268 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.2■□□□□ 0.5
TAF4O00268 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TAF4O00268 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.2■□□□□ 0.5
TAF4O00268 AC125437.2-201ENST00000625180 2167 ntBASIC18.2■□□□□ 0.5
TAF4O00268 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.2■□□□□ 0.5
TAF4O00268 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TAF4O00268 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TAF4O00268 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TAF4O00268 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.19■□□□□ 0.5
TAF4O00268 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TAF4O00268 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.19■□□□□ 0.5
TAF4O00268 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TAF4O00268 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.19■□□□□ 0.5
TAF4O00268 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TAF4O00268 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TAF4O00268 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
TAF4O00268 AC092597.1-201ENST00000487352 616 ntBASIC18.19■□□□□ 0.5
TAF4O00268 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.19■□□□□ 0.5
TAF4O00268 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.19■□□□□ 0.5
TAF4O00268 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.19■□□□□ 0.5
TAF4O00268 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TAF4O00268 AC120114.3-201ENST00000611923 658 ntBASIC18.19■□□□□ 0.5
TAF4O00268 BX640515.1-201ENST00000617215 977 ntBASIC18.19■□□□□ 0.5
TAF4O00268 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.19■□□□□ 0.5
TAF4O00268 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TAF4O00268 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TAF4O00268 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TAF4O00268 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TAF4O00268 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TAF4O00268 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TAF4O00268 LTB4R2-202ENST00000528054 3092 ntBASIC18.19■□□□□ 0.5
TAF4O00268 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
TAF4O00268 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TAF4O00268 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TAF4O00268 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.18■□□□□ 0.5
TAF4O00268 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TAF4O00268 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TAF4O00268 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TAF4O00268 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TAF4O00268 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TAF4O00268 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TAF4O00268 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TAF4O00268 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.18■□□□□ 0.5
TAF4O00268 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms