Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 AL121829.2-201ENST00000620908 328 ntBASIC16.24■□□□□ 0.19
SHISA3A0PJX4 MYC-208ENST00000641036 567 ntBASIC16.24■□□□□ 0.19
SHISA3A0PJX4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 AF201337.1-201ENST00000520239 748 ntBASIC16.23■□□□□ 0.19
SHISA3A0PJX4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.23■□□□□ 0.19
SHISA3A0PJX4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.22■□□□□ 0.19
SHISA3A0PJX4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 AC120498.8-201ENST00000614275 531 ntBASIC16.22■□□□□ 0.19
SHISA3A0PJX4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
SHISA3A0PJX4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms