Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 KRT8P11-201ENST00000409686 1436 ntBASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 HTR7P1-201ENST00000538670 1336 ntBASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 AC104581.1-202ENST00000635932 2618 ntBASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 AC073592.3-201ENST00000625118 1834 ntBASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 AC026271.3-201ENST00000571884 352 ntBASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 AC006058.3-201ENST00000606217 1069 ntBASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 AL031985.4-201ENST00000642138 673 ntBASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV30A0A087WSZ9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 AC068587.9-201ENST00000641814 219 ntBASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 KRT16P1-201ENST00000399124 1418 ntBASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 AC009113.1-201ENST00000570267 2443 ntBASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRAV30A0A087WSZ9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms