Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 AC080038.1-201ENST00000611274 1154 ntBASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
IGKV2-28A0A075B6P5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 AC012317.2-201ENST00000623305 2251 ntBASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 AC124067.4-201ENST00000519691 2379 ntBASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 MIR663A-201ENST00000385250 93 ntBASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 AC133552.2-202ENST00000575694 574 ntBASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 AC135776.1-201ENST00000319817 2481 ntBASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
IGKV2-28A0A075B6P5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 AC073111.5-205ENST00000641717 521 ntBASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 AC080080.1-201ENST00000625121 2420 ntBASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 AL645608.8-201ENST00000606034 2086 ntBASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 TNRC18P3-201ENST00000441896 2691 ntBASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.31□□□□□ -0.44
IGKV2-28A0A075B6P5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms