Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 AP006587.1-201ENST00000534129 1502 ntBASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 AC138028.4-201ENST00000564984 1845 ntBASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 AC135776.1-201ENST00000319817 2481 ntBASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGB1Q9Y5G3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHGB1Q9Y5G3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB1Q9Y5G3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB1Q9Y5G3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB1Q9Y5G3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB1Q9Y5G3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHGB1Q9Y5G3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB1Q9Y5G3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB1Q9Y5G3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.08■□□□□ 0.33
PCDHGB1Q9Y5G3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB1Q9Y5G3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB1Q9Y5G3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 TNRC18P3-201ENST00000441896 2691 ntBASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms