Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 KRT18P41-201ENST00000518924 1277 ntBASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.74■□□□□ 0.59
TCAF1Q9Y4C2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 AC079598.2-202ENST00000546624 1451 ntBASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 MIR564-202ENST00000385049 94 ntBASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 SNORA78-201ENST00000459373 127 ntBASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 MIR4674-201ENST00000582457 87 ntBASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 AP000525.1-201ENST00000608286 694 ntBASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCAF1Q9Y4C2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCAF1Q9Y4C2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 AC020763.4-201ENST00000623414 4170 ntBASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 FITM1-202ENST00000559294 800 ntBASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 AL354751.1-201ENST00000412768 1863 ntBASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCAF1Q9Y4C2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
TCAF1Q9Y4C2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.58
TCAF1Q9Y4C2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms