Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
VPS45Q9NRW7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS45Q9NRW7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.25■□□□□ 0.67
VPS45Q9NRW7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS45Q9NRW7 AC006333.2-201ENST00000607957 2099 ntBASIC19.24■□□□□ 0.67
VPS45Q9NRW7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 AL136038.3-201ENST00000561909 1096 ntBASIC19.24■□□□□ 0.67
VPS45Q9NRW7 CKBP1-201ENST00000565489 1086 ntBASIC19.24■□□□□ 0.67
VPS45Q9NRW7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 AL023973.1-201ENST00000624619 620 ntBASIC19.24■□□□□ 0.67
VPS45Q9NRW7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS45Q9NRW7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS45Q9NRW7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 CA15P1-201ENST00000481698 905 ntBASIC19.22■□□□□ 0.67
VPS45Q9NRW7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 AC026471.1-201ENST00000564629 3026 ntBASIC19.22■□□□□ 0.67
VPS45Q9NRW7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 LETM1P2-201ENST00000597330 2178 ntBASIC19.22■□□□□ 0.67
VPS45Q9NRW7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS45Q9NRW7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms