Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.61■□□□□ 0.41
PRDM9Q9NQV7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PRDM9Q9NQV7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PRDM9Q9NQV7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRDM9Q9NQV7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRDM9Q9NQV7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRDM9Q9NQV7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRDM9Q9NQV7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRDM9Q9NQV7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.61■□□□□ 0.41
PRDM9Q9NQV7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRDM9Q9NQV7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRDM9Q9NQV7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 AP000523.1-201ENST00000398242 1049 ntBASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 AC036111.1-201ENST00000533973 1582 ntBASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 AC034236.2-201ENST00000606662 1610 ntBASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRDM9Q9NQV7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 AC008556.1-201ENST00000610908 2040 ntBASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 AC073592.3-201ENST00000625118 1834 ntBASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 HOXB1-202ENST00000577092 1414 ntBASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 AC009947.2-201ENST00000444014 672 ntBASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 NEK4P2-201ENST00000580004 1012 ntBASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PRDM9Q9NQV7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRDM9Q9NQV7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PRDM9Q9NQV7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRDM9Q9NQV7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRDM9Q9NQV7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PRDM9Q9NQV7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRDM9Q9NQV7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRDM9Q9NQV7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PRDM9Q9NQV7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
PRDM9Q9NQV7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRDM9Q9NQV7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 COX11P1-201ENST00000489116 835 ntBASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms