Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 MESTP1-201ENST00000404287 994 ntBASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 AC112777.1-201ENST00000540175 1423 ntBASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 AC090340.1-201ENST00000620778 4980 ntBASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 AC126763.1-201ENST00000552015 2118 ntBASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEUROD4Q9HD90 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 AC012618.2-201ENST00000428058 849 ntBASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 AC010331.1-201ENST00000611423 582 ntBASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 KRT8P45-201ENST00000414328 1447 ntBASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEUROD4Q9HD90 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 NUDT16P1-203ENST00000513809 620 ntBASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 KRT17P2-201ENST00000300992 1314 ntBASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 AL162741.1-201ENST00000565563 1558 ntBASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 AL109659.2-201ENST00000606809 1674 ntBASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 AL357033.4-201ENST00000617703 1807 ntBASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms