Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
VCX3BQ9H321 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
VCX3BQ9H321 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VCX3BQ9H321 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VCX3BQ9H321 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.77■□□□□ 0.44
VCX3BQ9H321 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
VCX3BQ9H321 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.77■□□□□ 0.44
VCX3BQ9H321 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VCX3BQ9H321 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VCX3BQ9H321 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.77■□□□□ 0.44
VCX3BQ9H321 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.77■□□□□ 0.44
VCX3BQ9H321 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VCX3BQ9H321 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.77■□□□□ 0.44
VCX3BQ9H321 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VCX3BQ9H321 MIR4466-201ENST00000606121 54 ntBASIC17.77■□□□□ 0.44
VCX3BQ9H321 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
VCX3BQ9H321 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
VCX3BQ9H321 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
VCX3BQ9H321 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
VCX3BQ9H321 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VCX3BQ9H321 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VCX3BQ9H321 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VCX3BQ9H321 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
VCX3BQ9H321 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.77■□□□□ 0.43
VCX3BQ9H321 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VCX3BQ9H321 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VCX3BQ9H321 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VCX3BQ9H321 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCX3BQ9H321 AC108860.2-201ENST00000562760 2183 ntBASIC17.76■□□□□ 0.43
VCX3BQ9H321 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCX3BQ9H321 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCX3BQ9H321 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCX3BQ9H321 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCX3BQ9H321 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 AC023632.3-201ENST00000521633 145 ntBASIC17.76■□□□□ 0.43
VCX3BQ9H321 AC008764.7-201ENST00000593779 1081 ntBASIC17.76■□□□□ 0.43
VCX3BQ9H321 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VCX3BQ9H321 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VCX3BQ9H321 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VCX3BQ9H321 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCX3BQ9H321 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VCX3BQ9H321 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.76■□□□□ 0.43
VCX3BQ9H321 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.76■□□□□ 0.43
VCX3BQ9H321 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VCX3BQ9H321 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.75■□□□□ 0.43
VCX3BQ9H321 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 LINC01126-201ENST00000623515 1646 ntBASIC17.75■□□□□ 0.43
VCX3BQ9H321 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VCX3BQ9H321 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3BQ9H321 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VCX3BQ9H321 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms