Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 AP000692.2-201ENST00000608391 879 ntBASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 TBC1D3P2-202ENST00000577902 1649 ntBASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
UPF3BQ9BZI7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 AC008622.2-201ENST00000617006 1229 ntBASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 FSCN1P1-201ENST00000568912 1481 ntBASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
UPF3BQ9BZI7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 AR-207ENST00000612010 3896 ntTSL 5 BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC22.24■■□□□ 1.15
UPF3BQ9BZI7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 AL135905.2-201ENST00000584934 1404 ntBASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 RPS2P55-201ENST00000397318 883 ntBASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 AC107956.1-201ENST00000494359 873 ntBASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 MIR4497-201ENST00000583208 89 ntBASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 REXO1L12P-201ENST00000622156 912 ntBASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 AC113410.3-201ENST00000623366 203 ntBASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 AC008556.1-201ENST00000610908 2040 ntBASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
UPF3BQ9BZI7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms