Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.97■□□□□ 0.31
NPAS1Q99742 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS1Q99742 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS1Q99742 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NPAS1Q99742 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS1Q99742 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS1Q99742 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS1Q99742 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.97■□□□□ 0.31
NPAS1Q99742 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS1Q99742 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS1Q99742 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS1Q99742 TERF1P1-201ENST00000311003 1181 ntBASIC16.97■□□□□ 0.31
NPAS1Q99742 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NPAS1Q99742 HMGA1P5-201ENST00000412453 271 ntBASIC16.97■□□□□ 0.31
NPAS1Q99742 KRT18P57-201ENST00000443599 1254 ntBASIC16.97■□□□□ 0.31
NPAS1Q99742 MCCD1P1-208ENST00000445732 328 ntBASIC16.97■□□□□ 0.31
NPAS1Q99742 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.97■□□□□ 0.31
NPAS1Q99742 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS1Q99742 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NPAS1Q99742 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NPAS1Q99742 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.97■□□□□ 0.31
NPAS1Q99742 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS1Q99742 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS1Q99742 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.97■□□□□ 0.31
NPAS1Q99742 AL109659.2-201ENST00000606809 1674 ntBASIC16.97■□□□□ 0.31
NPAS1Q99742 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS1Q99742 AL031598.1-201ENST00000561511 1773 ntBASIC16.97■□□□□ 0.31
NPAS1Q99742 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS1Q99742 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS1Q99742 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS1Q99742 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS1Q99742 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
NPAS1Q99742 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS1Q99742 AC073508.3-201ENST00000619697 1419 ntBASIC16.96■□□□□ 0.31
NPAS1Q99742 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS1Q99742 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.96■□□□□ 0.31
NPAS1Q99742 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS1Q99742 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NPAS1Q99742 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.96■□□□□ 0.31
NPAS1Q99742 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS1Q99742 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS1Q99742 FZD10-202ENST00000539839 3282 ntBASIC16.96■□□□□ 0.31
NPAS1Q99742 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS1Q99742 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS1Q99742 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS1Q99742 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.96■□□□□ 0.31
NPAS1Q99742 RCN1P1-201ENST00000400413 996 ntBASIC16.96■□□□□ 0.31
NPAS1Q99742 AC113347.1-201ENST00000413321 391 ntBASIC16.96■□□□□ 0.31
NPAS1Q99742 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.96■□□□□ 0.31
NPAS1Q99742 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.96■□□□□ 0.31
NPAS1Q99742 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.96■□□□□ 0.31
NPAS1Q99742 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS1Q99742 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
NPAS1Q99742 AC005363.2-201ENST00000618631 242 ntBASIC16.96■□□□□ 0.31
NPAS1Q99742 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS1Q99742 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.96■□□□□ 0.31
NPAS1Q99742 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS1Q99742 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS1Q99742 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS1Q99742 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS1Q99742 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS1Q99742 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS1Q99742 AC099343.3-201ENST00000605834 2503 ntBASIC16.96■□□□□ 0.3
NPAS1Q99742 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NPAS1Q99742 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NPAS1Q99742 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NPAS1Q99742 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NPAS1Q99742 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NPAS1Q99742 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.95■□□□□ 0.3
NPAS1Q99742 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.95■□□□□ 0.3
NPAS1Q99742 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NPAS1Q99742 NOC2LP1-202ENST00000452600 2235 ntBASIC16.95■□□□□ 0.3
NPAS1Q99742 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS1Q99742 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS1Q99742 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS1Q99742 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NPAS1Q99742 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.95■□□□□ 0.3
NPAS1Q99742 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS1Q99742 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.95■□□□□ 0.3
NPAS1Q99742 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.95■□□□□ 0.3
NPAS1Q99742 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.95■□□□□ 0.3
NPAS1Q99742 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.95■□□□□ 0.3
NPAS1Q99742 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.95■□□□□ 0.3
NPAS1Q99742 AL138966.2-201ENST00000621997 464 ntBASIC16.95■□□□□ 0.3
NPAS1Q99742 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS1Q99742 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS1Q99742 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.95■□□□□ 0.3
NPAS1Q99742 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NPAS1Q99742 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.95■□□□□ 0.3
NPAS1Q99742 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.95■□□□□ 0.3
NPAS1Q99742 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NPAS1Q99742 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.95■□□□□ 0.3
NPAS1Q99742 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NPAS1Q99742 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPAS1Q99742 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NPAS1Q99742 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NPAS1Q99742 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPAS1Q99742 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPAS1Q99742 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPAS1Q99742 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms