Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 YBX1P10-201ENST00000444752 975 ntBASIC12.42□□□□□ -0.42
LITAFQ99732 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC12.42□□□□□ -0.42
LITAFQ99732 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC12.42□□□□□ -0.42
LITAFQ99732 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC12.42□□□□□ -0.42
LITAFQ99732 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC12.42□□□□□ -0.42
LITAFQ99732 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.42□□□□□ -0.42
LITAFQ99732 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 KRT8P45-201ENST00000414328 1447 ntBASIC12.42□□□□□ -0.42
LITAFQ99732 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
LITAFQ99732 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.42□□□□□ -0.42
LITAFQ99732 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LITAFQ99732 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
LITAFQ99732 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
LITAFQ99732 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.42□□□□□ -0.42
LITAFQ99732 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LITAFQ99732 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
LITAFQ99732 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
LITAFQ99732 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC12.41□□□□□ -0.42
LITAFQ99732 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
LITAFQ99732 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC12.41□□□□□ -0.42
LITAFQ99732 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
LITAFQ99732 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 KRT19P1-201ENST00000405746 1186 ntBASIC12.41□□□□□ -0.42
LITAFQ99732 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC12.41□□□□□ -0.42
LITAFQ99732 AL355472.2-201ENST00000422958 438 ntBASIC12.41□□□□□ -0.42
LITAFQ99732 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 SERP1-205ENST00000487153 657 ntTSL 4 BASIC12.41□□□□□ -0.42
LITAFQ99732 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
LITAFQ99732 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC12.41□□□□□ -0.42
LITAFQ99732 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.41□□□□□ -0.42
LITAFQ99732 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12.41□□□□□ -0.42
LITAFQ99732 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
LITAFQ99732 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LITAFQ99732 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.4□□□□□ -0.42
LITAFQ99732 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LITAFQ99732 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LITAFQ99732 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LITAFQ99732 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LITAFQ99732 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.4□□□□□ -0.42
LITAFQ99732 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LITAFQ99732 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LITAFQ99732 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LITAFQ99732 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
LITAFQ99732 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LITAFQ99732 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LITAFQ99732 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC12.4□□□□□ -0.42
LITAFQ99732 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC12.4□□□□□ -0.42
LITAFQ99732 TSPY23P-201ENST00000440136 739 ntBASIC12.4□□□□□ -0.42
LITAFQ99732 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LITAFQ99732 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC12.4□□□□□ -0.42
LITAFQ99732 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC12.4□□□□□ -0.42
LITAFQ99732 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC12.4□□□□□ -0.42
LITAFQ99732 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC12.4□□□□□ -0.42
LITAFQ99732 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC12.4□□□□□ -0.42
LITAFQ99732 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC12.4□□□□□ -0.42
LITAFQ99732 AL589743.5-201ENST00000616611 1050 ntBASIC12.4□□□□□ -0.42
LITAFQ99732 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC12.4□□□□□ -0.42
LITAFQ99732 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LITAFQ99732 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LITAFQ99732 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
LITAFQ99732 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LITAFQ99732 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LITAFQ99732 AL391005.1-201ENST00000623953 2435 ntBASIC12.4□□□□□ -0.42
LITAFQ99732 AIRN-201ENST00000601203 4374 ntBASIC12.4□□□□□ -0.42
LITAFQ99732 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LITAFQ99732 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC12.4□□□□□ -0.42
LITAFQ99732 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LITAFQ99732 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LITAFQ99732 AL162727.3-201ENST00000635661 2787 ntBASIC12.4□□□□□ -0.43
LITAFQ99732 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC12.4□□□□□ -0.43
LITAFQ99732 UBALD1-205ENST00000590891 2641 ntBASIC12.4□□□□□ -0.43
LITAFQ99732 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC12.39□□□□□ -0.43
LITAFQ99732 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms