Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC007225.1-201ENST00000566331 1836 ntBASIC18.82■□□□□ 0.6
PHOX2BQ99453 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 AL020996.1-203ENST00000536896 2307 ntBASIC18.82■□□□□ 0.6
PHOX2BQ99453 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHOX2BQ99453 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PHOX2BQ99453 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 AC090616.6-201ENST00000582640 721 ntBASIC18.82■□□□□ 0.6
PHOX2BQ99453 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 NSUN5P1-202ENST00000421140 1535 ntBASIC18.82■□□□□ 0.6
PHOX2BQ99453 NSUN5P2-203ENST00000457352 1529 ntBASIC18.82■□□□□ 0.6
PHOX2BQ99453 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHOX2BQ99453 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHOX2BQ99453 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHOX2BQ99453 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHOX2BQ99453 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHOX2BQ99453 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHOX2BQ99453 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.81■□□□□ 0.6
PHOX2BQ99453 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHOX2BQ99453 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PHOX2BQ99453 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHOX2BQ99453 AC112907.3-201ENST00000577781 2400 ntBASIC18.81■□□□□ 0.6
PHOX2BQ99453 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHOX2BQ99453 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHOX2BQ99453 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHOX2BQ99453 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHOX2BQ99453 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PHOX2BQ99453 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.81■□□□□ 0.6
PHOX2BQ99453 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.81■□□□□ 0.6
PHOX2BQ99453 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.81■□□□□ 0.6
PHOX2BQ99453 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.81■□□□□ 0.6
PHOX2BQ99453 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.81■□□□□ 0.6
PHOX2BQ99453 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PHOX2BQ99453 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PHOX2BQ99453 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PHOX2BQ99453 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHOX2BQ99453 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHOX2BQ99453 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHOX2BQ99453 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PHOX2BQ99453 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHOX2BQ99453 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHOX2BQ99453 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHOX2BQ99453 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PHOX2BQ99453 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHOX2BQ99453 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PHOX2BQ99453 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PHOX2BQ99453 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHOX2BQ99453 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHOX2BQ99453 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.8■□□□□ 0.6
PHOX2BQ99453 HNRNPDP1-201ENST00000439535 754 ntBASIC18.8■□□□□ 0.6
PHOX2BQ99453 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.8■□□□□ 0.6
PHOX2BQ99453 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHOX2BQ99453 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHOX2BQ99453 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PHOX2BQ99453 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.8■□□□□ 0.6
PHOX2BQ99453 FAM197Y3-203ENST00000618346 717 ntBASIC18.8■□□□□ 0.6
PHOX2BQ99453 PHGDH-210ENST00000641115 1638 ntBASIC18.8■□□□□ 0.6
PHOX2BQ99453 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHOX2BQ99453 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHOX2BQ99453 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHOX2BQ99453 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHOX2BQ99453 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PHOX2BQ99453 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.8■□□□□ 0.6
PHOX2BQ99453 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.8■□□□□ 0.6
PHOX2BQ99453 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.79■□□□□ 0.6
PHOX2BQ99453 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHOX2BQ99453 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHOX2BQ99453 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHOX2BQ99453 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHOX2BQ99453 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHOX2BQ99453 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHOX2BQ99453 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHOX2BQ99453 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHOX2BQ99453 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.79■□□□□ 0.6
PHOX2BQ99453 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.79■□□□□ 0.6
PHOX2BQ99453 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.79■□□□□ 0.6
PHOX2BQ99453 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHOX2BQ99453 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.79■□□□□ 0.6
PHOX2BQ99453 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.79■□□□□ 0.6
PHOX2BQ99453 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.79■□□□□ 0.6
PHOX2BQ99453 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.79■□□□□ 0.6
PHOX2BQ99453 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHOX2BQ99453 AP005901.3-202ENST00000581653 237 ntBASIC18.79■□□□□ 0.6
PHOX2BQ99453 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.79■□□□□ 0.6
PHOX2BQ99453 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHOX2BQ99453 AL355877.3-201ENST00000622820 899 ntBASIC18.79■□□□□ 0.6
PHOX2BQ99453 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHOX2BQ99453 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHOX2BQ99453 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
PHOX2BQ99453 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHOX2BQ99453 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms