Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SPENQ96T58 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPENQ96T58 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.8■□□□□ 0.28
SPENQ96T58 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPENQ96T58 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.8■□□□□ 0.28
SPENQ96T58 IGHV3-22-201ENST00000520721 359 ntBASIC16.8■□□□□ 0.28
SPENQ96T58 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.8■□□□□ 0.28
SPENQ96T58 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.8■□□□□ 0.28
SPENQ96T58 AC099336.1-202ENST00000602961 463 ntBASIC16.8■□□□□ 0.28
SPENQ96T58 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.79■□□□□ 0.28
SPENQ96T58 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPENQ96T58 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPENQ96T58 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.79■□□□□ 0.28
SPENQ96T58 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.79■□□□□ 0.28
SPENQ96T58 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SPENQ96T58 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.79■□□□□ 0.28
SPENQ96T58 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPENQ96T58 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SPENQ96T58 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPENQ96T58 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.79■□□□□ 0.28
SPENQ96T58 KRT8P3-201ENST00000519669 1449 ntBASIC16.79■□□□□ 0.28
SPENQ96T58 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPENQ96T58 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPENQ96T58 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPENQ96T58 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SPENQ96T58 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPENQ96T58 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.79■□□□□ 0.28
SPENQ96T58 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.79■□□□□ 0.28
SPENQ96T58 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.79■□□□□ 0.28
SPENQ96T58 AL355385.1-201ENST00000606123 409 ntBASIC16.79■□□□□ 0.28
SPENQ96T58 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPENQ96T58 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.79■□□□□ 0.28
SPENQ96T58 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPENQ96T58 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPENQ96T58 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPENQ96T58 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.79■□□□□ 0.28
SPENQ96T58 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPENQ96T58 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.78■□□□□ 0.28
SPENQ96T58 AC139887.3-201ENST00000568585 713 ntBASIC16.78■□□□□ 0.28
SPENQ96T58 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.78■□□□□ 0.28
SPENQ96T58 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.78■□□□□ 0.28
SPENQ96T58 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.78■□□□□ 0.28
SPENQ96T58 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SPENQ96T58 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SPENQ96T58 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.78■□□□□ 0.28
SPENQ96T58 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.78■□□□□ 0.28
SPENQ96T58 AL031284.1-201ENST00000419297 478 ntBASIC16.78■□□□□ 0.28
SPENQ96T58 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.78■□□□□ 0.28
SPENQ96T58 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SPENQ96T58 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.78■□□□□ 0.28
SPENQ96T58 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.78■□□□□ 0.28
SPENQ96T58 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
SPENQ96T58 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.78■□□□□ 0.28
SPENQ96T58 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.78■□□□□ 0.28
SPENQ96T58 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.78■□□□□ 0.28
SPENQ96T58 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.78■□□□□ 0.28
SPENQ96T58 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.78■□□□□ 0.28
SPENQ96T58 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.78■□□□□ 0.28
SPENQ96T58 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SPENQ96T58 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SPENQ96T58 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPENQ96T58 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.77■□□□□ 0.28
SPENQ96T58 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SPENQ96T58 AC096582.2-201ENST00000510860 516 ntBASIC16.77■□□□□ 0.28
SPENQ96T58 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPENQ96T58 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPENQ96T58 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SPENQ96T58 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SPENQ96T58 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPENQ96T58 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPENQ96T58 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SPENQ96T58 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPENQ96T58 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPENQ96T58 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPENQ96T58 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPENQ96T58 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPENQ96T58 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPENQ96T58 RCC2P3-201ENST00000418112 1537 ntBASIC16.77■□□□□ 0.27
SPENQ96T58 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SPENQ96T58 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.77■□□□□ 0.27
SPENQ96T58 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SPENQ96T58 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SPENQ96T58 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms