Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 AL135905.2-201ENST00000584934 1404 ntBASIC19.21■□□□□ 0.67
C9orf72Q96LT7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.2■□□□□ 0.66
C9orf72Q96LT7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
C9orf72Q96LT7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 RARRES2P10-201ENST00000564312 460 ntBASIC19.19■□□□□ 0.66
C9orf72Q96LT7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 AP001412.1-201ENST00000608405 714 ntBASIC19.19■□□□□ 0.66
C9orf72Q96LT7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 AP000997.3-201ENST00000623333 2250 ntBASIC19.19■□□□□ 0.66
C9orf72Q96LT7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 HCG11-201ENST00000411553 5696 ntBASIC19.19■□□□□ 0.66
C9orf72Q96LT7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf72Q96LT7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 HEIH-201ENST00000623091 1652 ntBASIC19.18■□□□□ 0.66
C9orf72Q96LT7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 AL049637.2-201ENST00000641778 930 ntBASIC19.18■□□□□ 0.66
C9orf72Q96LT7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf72Q96LT7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms