Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RTP4Q96DX8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTP4Q96DX8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.03■□□□□ 0.64
RTP4Q96DX8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTP4Q96DX8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTP4Q96DX8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTP4Q96DX8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RTP4Q96DX8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTP4Q96DX8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RTP4Q96DX8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTP4Q96DX8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTP4Q96DX8 AP000593.1-201ENST00000393668 712 ntBASIC19.03■□□□□ 0.64
RTP4Q96DX8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.03■□□□□ 0.64
RTP4Q96DX8 MCCD1P1-208ENST00000445732 328 ntBASIC19.03■□□□□ 0.64
RTP4Q96DX8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.03■□□□□ 0.64
RTP4Q96DX8 SLC25A1P4-201ENST00000567977 778 ntBASIC19.03■□□□□ 0.64
RTP4Q96DX8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.03■□□□□ 0.64
RTP4Q96DX8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RTP4Q96DX8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.03■□□□□ 0.64
RTP4Q96DX8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.03■□□□□ 0.64
RTP4Q96DX8 AC093677.2-201ENST00000600169 1863 ntBASIC19.03■□□□□ 0.64
RTP4Q96DX8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTP4Q96DX8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.03■□□□□ 0.64
RTP4Q96DX8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTP4Q96DX8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTP4Q96DX8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTP4Q96DX8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
RTP4Q96DX8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RTP4Q96DX8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTP4Q96DX8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RTP4Q96DX8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTP4Q96DX8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.02■□□□□ 0.64
RTP4Q96DX8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.02■□□□□ 0.64
RTP4Q96DX8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.02■□□□□ 0.64
RTP4Q96DX8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTP4Q96DX8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RTP4Q96DX8 AC087499.1-201ENST00000418141 1075 ntBASIC19.02■□□□□ 0.64
RTP4Q96DX8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTP4Q96DX8 AC097488.1-201ENST00000507834 756 ntBASIC19.02■□□□□ 0.64
RTP4Q96DX8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.02■□□□□ 0.64
RTP4Q96DX8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.02■□□□□ 0.64
RTP4Q96DX8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.02■□□□□ 0.64
RTP4Q96DX8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.02■□□□□ 0.64
RTP4Q96DX8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTP4Q96DX8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.02■□□□□ 0.64
RTP4Q96DX8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.02■□□□□ 0.64
RTP4Q96DX8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.02■□□□□ 0.64
RTP4Q96DX8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RTP4Q96DX8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.02■□□□□ 0.63
RTP4Q96DX8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.02■□□□□ 0.63
RTP4Q96DX8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
RTP4Q96DX8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.02■□□□□ 0.63
RTP4Q96DX8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
RTP4Q96DX8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RTP4Q96DX8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
RTP4Q96DX8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTP4Q96DX8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RTP4Q96DX8 AC135776.1-201ENST00000319817 2481 ntBASIC19.01■□□□□ 0.63
RTP4Q96DX8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTP4Q96DX8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
RTP4Q96DX8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
RTP4Q96DX8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
RTP4Q96DX8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.01■□□□□ 0.63
RTP4Q96DX8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTP4Q96DX8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTP4Q96DX8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RTP4Q96DX8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTP4Q96DX8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RTP4Q96DX8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTP4Q96DX8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTP4Q96DX8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RTP4Q96DX8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTP4Q96DX8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.01■□□□□ 0.63
RTP4Q96DX8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.01■□□□□ 0.63
RTP4Q96DX8 AP005242.2-201ENST00000580065 1175 ntBASIC19.01■□□□□ 0.63
RTP4Q96DX8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.01■□□□□ 0.63
RTP4Q96DX8 AC026471.5-201ENST00000615068 467 ntBASIC19.01■□□□□ 0.63
RTP4Q96DX8 AC133561.5-201ENST00000635547 218 ntBASIC19.01■□□□□ 0.63
RTP4Q96DX8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTP4Q96DX8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.01■□□□□ 0.63
RTP4Q96DX8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.01■□□□□ 0.63
RTP4Q96DX8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RTP4Q96DX8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.01■□□□□ 0.63
RTP4Q96DX8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.01■□□□□ 0.63
RTP4Q96DX8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTP4Q96DX8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTP4Q96DX8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTP4Q96DX8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTP4Q96DX8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTP4Q96DX8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTP4Q96DX8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19■□□□□ 0.63
RTP4Q96DX8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RTP4Q96DX8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTP4Q96DX8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19■□□□□ 0.63
RTP4Q96DX8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTP4Q96DX8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RTP4Q96DX8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RTP4Q96DX8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTP4Q96DX8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
RTP4Q96DX8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms