Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 AL671883.3-201ENST00000603274 991 ntBASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SNRNP40Q96DI7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 RN7SL606P-201ENST00000472779 293 ntBASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 VENTXP7-201ENST00000475503 772 ntBASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 AC064862.7-201ENST00000604520 867 ntBASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 REXO1L6P-202ENST00000619970 1078 ntBASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 NSUN5P1-202ENST00000421140 1535 ntBASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 NSUN5P2-203ENST00000457352 1529 ntBASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNRNP40Q96DI7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 AC034236.2-201ENST00000606662 1610 ntBASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 NUS1P2-201ENST00000417358 873 ntBASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 AF238378.1-201ENST00000526806 358 ntBASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 MIR3180-4-201ENST00000582223 153 ntBASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 AC024563.2-201ENST00000603282 481 ntBASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 AF228730.7-201ENST00000641842 219 ntBASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 AC112907.3-201ENST00000577781 2400 ntBASIC16.74■□□□□ 0.27
SNRNP40Q96DI7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 AC006333.2-201ENST00000607957 2099 ntBASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 TEX21P-204ENST00000641479 1693 ntBASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 AC117500.6-201ENST00000624871 588 ntBASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.73■□□□□ 0.27
SNRNP40Q96DI7 PCDHAC2-203ENST00000615316 3011 ntBASIC16.72■□□□□ 0.27
SNRNP40Q96DI7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms