Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ECHDC3Q96DC8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.65■□□□□ 0.58
ECHDC3Q96DC8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.65■□□□□ 0.58
ECHDC3Q96DC8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
ECHDC3Q96DC8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ECHDC3Q96DC8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.65■□□□□ 0.58
ECHDC3Q96DC8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ECHDC3Q96DC8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
ECHDC3Q96DC8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 ANO7L1-203ENST00000602586 1720 ntBASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC3Q96DC8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 AL157888.1-201ENST00000631930 593 ntBASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 AC112777.1-201ENST00000540175 1423 ntBASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC3Q96DC8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 AC098818.2-201ENST00000564925 2320 ntBASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 AL031133.1-201ENST00000406807 723 ntBASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC3Q96DC8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 AL499627.1-201ENST00000569373 2188 ntBASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 AC112907.2-201ENST00000448639 330 ntBASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 AL671277.2-201ENST00000458060 996 ntBASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ECHDC3Q96DC8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC3Q96DC8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.6■□□□□ 0.57
ECHDC3Q96DC8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC3Q96DC8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ECHDC3Q96DC8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC3Q96DC8 AL163051.1-201ENST00000569214 1512 ntBASIC18.6■□□□□ 0.57
ECHDC3Q96DC8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.6■□□□□ 0.57
ECHDC3Q96DC8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC3Q96DC8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC3Q96DC8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC3Q96DC8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC3Q96DC8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC3Q96DC8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms