Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 AP002383.4-201ENST00000442518 975 ntBASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 FDX1P1-201ENST00000449115 551 ntBASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 AL162741.1-201ENST00000565563 1558 ntBASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 FAAHP1-202ENST00000446499 1238 ntBASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 KRT8P10-201ENST00000450021 1447 ntBASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1AQ96AJ9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VTI1AQ96AJ9 AC018445.3-201ENST00000624177 1945 ntBASIC21.02■□□□□ 0.95
VTI1AQ96AJ9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
VTI1AQ96AJ9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
VTI1AQ96AJ9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.02■□□□□ 0.95
VTI1AQ96AJ9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
VTI1AQ96AJ9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1AQ96AJ9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1AQ96AJ9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.01■□□□□ 0.95
VTI1AQ96AJ9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1AQ96AJ9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1AQ96AJ9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.01■□□□□ 0.95
VTI1AQ96AJ9 MIR3180-5-201ENST00000583743 153 ntBASIC21.01■□□□□ 0.95
VTI1AQ96AJ9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.01■□□□□ 0.95
VTI1AQ96AJ9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1AQ96AJ9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1AQ96AJ9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.01■□□□□ 0.95
VTI1AQ96AJ9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1AQ96AJ9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1AQ96AJ9 SDHAP1-207ENST00000440850 2000 ntBASIC21■□□□□ 0.95
VTI1AQ96AJ9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21■□□□□ 0.95
VTI1AQ96AJ9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
VTI1AQ96AJ9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTI1AQ96AJ9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21■□□□□ 0.95
VTI1AQ96AJ9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTI1AQ96AJ9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
VTI1AQ96AJ9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
VTI1AQ96AJ9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21■□□□□ 0.95
VTI1AQ96AJ9 CHCHD2P8-201ENST00000429873 447 ntBASIC21■□□□□ 0.95
VTI1AQ96AJ9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21■□□□□ 0.95
VTI1AQ96AJ9 AC112497.1-201ENST00000624824 639 ntBASIC21■□□□□ 0.95
VTI1AQ96AJ9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21■□□□□ 0.95
VTI1AQ96AJ9 AL157888.1-201ENST00000631930 593 ntBASIC21■□□□□ 0.95
VTI1AQ96AJ9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
VTI1AQ96AJ9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
VTI1AQ96AJ9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21■□□□□ 0.95
VTI1AQ96AJ9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
VTI1AQ96AJ9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21■□□□□ 0.95
VTI1AQ96AJ9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTI1AQ96AJ9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
VTI1AQ96AJ9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21■□□□□ 0.95
VTI1AQ96AJ9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTI1AQ96AJ9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21■□□□□ 0.95
VTI1AQ96AJ9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21■□□□□ 0.95
VTI1AQ96AJ9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTI1AQ96AJ9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTI1AQ96AJ9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
VTI1AQ96AJ9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VTI1AQ96AJ9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTI1AQ96AJ9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTI1AQ96AJ9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.99■□□□□ 0.95
VTI1AQ96AJ9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VTI1AQ96AJ9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTI1AQ96AJ9 TSPY22P-201ENST00000427496 604 ntBASIC20.99■□□□□ 0.95
VTI1AQ96AJ9 AP000867.3-201ENST00000524675 377 ntBASIC20.99■□□□□ 0.95
VTI1AQ96AJ9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms