Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.74■□□□□ 0.27
CPNE4Q96A23 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE4Q96A23 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE4Q96A23 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.74■□□□□ 0.27
CPNE4Q96A23 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE4Q96A23 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE4Q96A23 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE4Q96A23 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CPNE4Q96A23 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CPNE4Q96A23 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE4Q96A23 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CPNE4Q96A23 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE4Q96A23 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE4Q96A23 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE4Q96A23 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CPNE4Q96A23 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.73■□□□□ 0.27
CPNE4Q96A23 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE4Q96A23 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE4Q96A23 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE4Q96A23 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CPNE4Q96A23 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE4Q96A23 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE4Q96A23 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.73■□□□□ 0.27
CPNE4Q96A23 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.73■□□□□ 0.27
CPNE4Q96A23 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CPNE4Q96A23 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.73■□□□□ 0.27
CPNE4Q96A23 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE4Q96A23 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CPNE4Q96A23 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE4Q96A23 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE4Q96A23 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE4Q96A23 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE4Q96A23 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CPNE4Q96A23 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE4Q96A23 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CPNE4Q96A23 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CPNE4Q96A23 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CPNE4Q96A23 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 AC034236.2-201ENST00000606662 1610 ntBASIC16.72■□□□□ 0.27
CPNE4Q96A23 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.72■□□□□ 0.27
CPNE4Q96A23 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE4Q96A23 MIR564-202ENST00000385049 94 ntBASIC16.72■□□□□ 0.27
CPNE4Q96A23 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE4Q96A23 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.72■□□□□ 0.27
CPNE4Q96A23 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
CPNE4Q96A23 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.72■□□□□ 0.27
CPNE4Q96A23 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE4Q96A23 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 AC140113.3-201ENST00000605663 199 ntBASIC16.72■□□□□ 0.27
CPNE4Q96A23 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE4Q96A23 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE4Q96A23 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CPNE4Q96A23 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE4Q96A23 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CPNE4Q96A23 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE4Q96A23 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE4Q96A23 AC090340.1-201ENST00000620778 4980 ntBASIC16.71■□□□□ 0.27
CPNE4Q96A23 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CPNE4Q96A23 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE4Q96A23 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CPNE4Q96A23 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE4Q96A23 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE4Q96A23 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.71■□□□□ 0.27
CPNE4Q96A23 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE4Q96A23 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
CPNE4Q96A23 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE4Q96A23 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE4Q96A23 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.71■□□□□ 0.27
CPNE4Q96A23 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE4Q96A23 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.71■□□□□ 0.27
CPNE4Q96A23 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.71■□□□□ 0.27
CPNE4Q96A23 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE4Q96A23 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE4Q96A23 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.71■□□□□ 0.27
CPNE4Q96A23 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.71■□□□□ 0.27
CPNE4Q96A23 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CPNE4Q96A23 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE4Q96A23 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
CPNE4Q96A23 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE4Q96A23 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE4Q96A23 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CPNE4Q96A23 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE4Q96A23 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CPNE4Q96A23 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms