Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
USP6NLQ92738 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.09■□□□□ 0.97
USP6NLQ92738 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6NLQ92738 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6NLQ92738 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP6NLQ92738 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6NLQ92738 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
USP6NLQ92738 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6NLQ92738 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP6NLQ92738 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.09■□□□□ 0.97
USP6NLQ92738 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
USP6NLQ92738 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP6NLQ92738 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6NLQ92738 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6NLQ92738 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP6NLQ92738 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6NLQ92738 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.08■□□□□ 0.97
USP6NLQ92738 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.08■□□□□ 0.97
USP6NLQ92738 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
USP6NLQ92738 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP6NLQ92738 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP6NLQ92738 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP6NLQ92738 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP6NLQ92738 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP6NLQ92738 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
USP6NLQ92738 MIR574-201ENST00000385209 96 ntBASIC21.08■□□□□ 0.97
USP6NLQ92738 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
USP6NLQ92738 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.08■□□□□ 0.97
USP6NLQ92738 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP6NLQ92738 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.08■□□□□ 0.97
USP6NLQ92738 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP6NLQ92738 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.08■□□□□ 0.97
USP6NLQ92738 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.08■□□□□ 0.97
USP6NLQ92738 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
USP6NLQ92738 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.08■□□□□ 0.97
USP6NLQ92738 AF228730.7-201ENST00000641842 219 ntBASIC21.08■□□□□ 0.97
USP6NLQ92738 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP6NLQ92738 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP6NLQ92738 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.08■□□□□ 0.96
USP6NLQ92738 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP6NLQ92738 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
USP6NLQ92738 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6NLQ92738 KRT89P-201ENST00000620027 1478 ntBASIC21.07■□□□□ 0.96
USP6NLQ92738 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6NLQ92738 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
USP6NLQ92738 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP6NLQ92738 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6NLQ92738 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP6NLQ92738 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.07■□□□□ 0.96
USP6NLQ92738 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6NLQ92738 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.07■□□□□ 0.96
USP6NLQ92738 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6NLQ92738 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6NLQ92738 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.07■□□□□ 0.96
USP6NLQ92738 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP6NLQ92738 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6NLQ92738 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6NLQ92738 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
USP6NLQ92738 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.07■□□□□ 0.96
USP6NLQ92738 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.07■□□□□ 0.96
USP6NLQ92738 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.07■□□□□ 0.96
USP6NLQ92738 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
USP6NLQ92738 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.07■□□□□ 0.96
USP6NLQ92738 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP6NLQ92738 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
USP6NLQ92738 AC117500.6-201ENST00000624871 588 ntBASIC21.07■□□□□ 0.96
USP6NLQ92738 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
USP6NLQ92738 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.07■□□□□ 0.96
USP6NLQ92738 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.07■□□□□ 0.96
USP6NLQ92738 AL353692.3-201ENST00000407031 1396 ntBASIC21.07■□□□□ 0.96
USP6NLQ92738 FEM1AP3-201ENST00000403722 1741 ntBASIC21.07■□□□□ 0.96
USP6NLQ92738 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6NLQ92738 IL9RP2-201ENST00000423948 1312 ntBASIC21.06■□□□□ 0.96
USP6NLQ92738 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6NLQ92738 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.06■□□□□ 0.96
USP6NLQ92738 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP6NLQ92738 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6NLQ92738 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.06■□□□□ 0.96
USP6NLQ92738 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.06■□□□□ 0.96
USP6NLQ92738 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6NLQ92738 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6NLQ92738 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6NLQ92738 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6NLQ92738 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6NLQ92738 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.06■□□□□ 0.96
USP6NLQ92738 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.06■□□□□ 0.96
USP6NLQ92738 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
USP6NLQ92738 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP6NLQ92738 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.06■□□□□ 0.96
USP6NLQ92738 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.06■□□□□ 0.96
USP6NLQ92738 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.06■□□□□ 0.96
USP6NLQ92738 AC139530.3-201ENST00000620344 690 ntBASIC21.06■□□□□ 0.96
USP6NLQ92738 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6NLQ92738 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6NLQ92738 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6NLQ92738 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
USP6NLQ92738 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.06■□□□□ 0.96
USP6NLQ92738 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
USP6NLQ92738 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP6NLQ92738 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms