Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
DDX1Q92499 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
DDX1Q92499 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
DDX1Q92499 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX1Q92499 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DDX1Q92499 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DDX1Q92499 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DDX1Q92499 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.86■□□□□ 0.77
DDX1Q92499 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX1Q92499 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.86■□□□□ 0.77
DDX1Q92499 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX1Q92499 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX1Q92499 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX1Q92499 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX1Q92499 SLC25A3P1-201ENST00000443844 931 ntBASIC19.86■□□□□ 0.77
DDX1Q92499 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX1Q92499 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.86■□□□□ 0.77
DDX1Q92499 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.86■□□□□ 0.77
DDX1Q92499 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.86■□□□□ 0.77
DDX1Q92499 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX1Q92499 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX1Q92499 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DDX1Q92499 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX1Q92499 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
DDX1Q92499 AC112777.1-201ENST00000540175 1423 ntBASIC19.85■□□□□ 0.77
DDX1Q92499 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.85■□□□□ 0.77
DDX1Q92499 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX1Q92499 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
DDX1Q92499 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.85■□□□□ 0.77
DDX1Q92499 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX1Q92499 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX1Q92499 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.85■□□□□ 0.77
DDX1Q92499 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX1Q92499 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX1Q92499 MIR1238-201ENST00000408483 83 ntBASIC19.85■□□□□ 0.77
DDX1Q92499 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
DDX1Q92499 MCCD1P1-208ENST00000445732 328 ntBASIC19.85■□□□□ 0.77
DDX1Q92499 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
DDX1Q92499 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DDX1Q92499 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.85■□□□□ 0.77
DDX1Q92499 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.85■□□□□ 0.77
DDX1Q92499 KRT126P-201ENST00000549467 1181 ntBASIC19.85■□□□□ 0.77
DDX1Q92499 AL353719.1-201ENST00000566847 864 ntBASIC19.85■□□□□ 0.77
DDX1Q92499 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.85■□□□□ 0.77
DDX1Q92499 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.85■□□□□ 0.77
DDX1Q92499 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX1Q92499 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.85■□□□□ 0.77
DDX1Q92499 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX1Q92499 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
DDX1Q92499 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX1Q92499 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX1Q92499 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
DDX1Q92499 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.85■□□□□ 0.77
DDX1Q92499 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX1Q92499 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX1Q92499 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
DDX1Q92499 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.85■□□□□ 0.77
DDX1Q92499 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.85■□□□□ 0.77
DDX1Q92499 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX1Q92499 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
DDX1Q92499 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDX1Q92499 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX1Q92499 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.84■□□□□ 0.77
DDX1Q92499 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.84■□□□□ 0.77
DDX1Q92499 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX1Q92499 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX1Q92499 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.84■□□□□ 0.77
DDX1Q92499 SLC25A1P2-201ENST00000430693 912 ntBASIC19.84■□□□□ 0.77
DDX1Q92499 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.84■□□□□ 0.77
DDX1Q92499 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDX1Q92499 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.84■□□□□ 0.77
DDX1Q92499 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.84■□□□□ 0.77
DDX1Q92499 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.84■□□□□ 0.77
DDX1Q92499 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX1Q92499 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX1Q92499 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX1Q92499 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX1Q92499 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
DDX1Q92499 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX1Q92499 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX1Q92499 AC092338.2-201ENST00000568827 1415 ntBASIC19.84■□□□□ 0.77
DDX1Q92499 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX1Q92499 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX1Q92499 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DDX1Q92499 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX1Q92499 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX1Q92499 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.83■□□□□ 0.77
DDX1Q92499 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX1Q92499 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DDX1Q92499 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX1Q92499 LIN28AP1-201ENST00000429574 405 ntBASIC19.83■□□□□ 0.77
DDX1Q92499 AC104076.2-201ENST00000448912 469 ntBASIC19.83■□□□□ 0.77
DDX1Q92499 AP003041.3-201ENST00000527151 707 ntBASIC19.83■□□□□ 0.77
DDX1Q92499 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.83■□□□□ 0.76
DDX1Q92499 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDX1Q92499 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
DDX1Q92499 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.83■□□□□ 0.76
DDX1Q92499 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDX1Q92499 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
DDX1Q92499 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms