Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.44■□□□□ 0.7
PRUNE2Q8WUY3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRUNE2Q8WUY3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 RNA5SP416-201ENST00000516838 111 ntBASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 AC005829.1-201ENST00000570002 483 ntBASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 AC011840.4-201ENST00000578471 627 ntBASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PRUNE2Q8WUY3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.42■□□□□ 0.7
PRUNE2Q8WUY3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRUNE2Q8WUY3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PRUNE2Q8WUY3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PRUNE2Q8WUY3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRUNE2Q8WUY3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PRUNE2Q8WUY3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.42■□□□□ 0.7
PRUNE2Q8WUY3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PRUNE2Q8WUY3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.42■□□□□ 0.7
PRUNE2Q8WUY3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRUNE2Q8WUY3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.42■□□□□ 0.7
PRUNE2Q8WUY3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.42■□□□□ 0.7
PRUNE2Q8WUY3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRUNE2Q8WUY3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.42■□□□□ 0.7
PRUNE2Q8WUY3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
PRUNE2Q8WUY3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRUNE2Q8WUY3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRUNE2Q8WUY3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 AC254562.1-201ENST00000417586 456 ntBASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 DUX4L17-201ENST00000557360 1267 ntBASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 SNHG9-202ENST00000564014 471 ntBASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 AC005498.2-205ENST00000593218 784 ntBASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 AL353692.3-201ENST00000407031 1396 ntBASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 MEIS3P1-201ENST00000495167 958 ntBASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRUNE2Q8WUY3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRUNE2Q8WUY3 AL512408.1-201ENST00000569378 2000 ntBASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms