Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 AL512353.2-201ENST00000448759 1962 ntBASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 AC011498.5-201ENST00000592027 486 ntBASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 AL109659.2-201ENST00000606809 1674 ntBASIC19.56■□□□□ 0.72
SHKBP1Q8TBC3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 HLA-F-220ENST00000434407 884 ntBASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 MIR3917-201ENST00000580971 93 ntBASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.55■□□□□ 0.72
SHKBP1Q8TBC3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 AC008556.1-201ENST00000610908 2040 ntBASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 AC026471.1-201ENST00000564629 3026 ntBASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 AC016734.2-201ENST00000624325 1377 ntBASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 AC005332.7-201ENST00000614046 2005 ntBASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHKBP1Q8TBC3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 AL162741.1-201ENST00000565563 1558 ntBASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms