Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC2Q8TAQ2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC2Q8TAQ2 AC120498.9-201ENST00000339021 3867 ntBASIC21.84■■□□□ 1.09
SMARCC2Q8TAQ2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC2Q8TAQ2 RCN1P1-201ENST00000400413 996 ntBASIC21.84■■□□□ 1.09
SMARCC2Q8TAQ2 AC113347.1-201ENST00000413321 391 ntBASIC21.84■■□□□ 1.09
SMARCC2Q8TAQ2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC2Q8TAQ2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC2Q8TAQ2 RCC2P3-201ENST00000418112 1537 ntBASIC21.84■■□□□ 1.09
SMARCC2Q8TAQ2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.84■■□□□ 1.09
SMARCC2Q8TAQ2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC2Q8TAQ2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC2Q8TAQ2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC2Q8TAQ2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCC2Q8TAQ2 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.84■■□□□ 1.09
SMARCC2Q8TAQ2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 CA15P1-201ENST00000481698 905 ntBASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCC2Q8TAQ2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCC2Q8TAQ2 AL354751.1-201ENST00000412768 1863 ntBASIC21.83■■□□□ 1.08
SMARCC2Q8TAQ2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCC2Q8TAQ2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCC2Q8TAQ2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCC2Q8TAQ2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.83■■□□□ 1.08
SMARCC2Q8TAQ2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCC2Q8TAQ2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
SMARCC2Q8TAQ2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 AC005521.1-201ENST00000393351 872 ntBASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 AL137013.1-201ENST00000432946 1228 ntBASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 TSPY17P-201ENST00000450329 467 ntBASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SMARCC2Q8TAQ2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 KRT8P45-201ENST00000414328 1447 ntBASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 AC007663.1-201ENST00000438948 1240 ntBASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 FAM87A-204ENST00000613235 858 ntBASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 AL023803.3-201ENST00000615559 522 ntBASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms