Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 AC104390.1-201ENST00000555663 520 ntBASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNIP1Q8TAD8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 RN7SL606P-201ENST00000472779 293 ntBASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 POLD2P1-201ENST00000511220 997 ntBASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 HOXB1-202ENST00000577092 1414 ntBASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNIP1Q8TAD8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 AP005212.1-201ENST00000581547 1997 ntBASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 KRT18P23-201ENST00000435622 1283 ntBASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 TERC-201ENST00000602385 541 ntBASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 AC020907.5-201ENST00000624372 1936 ntBASIC17.53■□□□□ 0.4
SNIP1Q8TAD8 ZNF815P-204ENST00000434898 1737 ntBASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 IGHGP-201ENST00000390555 1178 ntBASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms