Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.08■□□□□ 0.33
LSMEM1Q8N8F7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.08■□□□□ 0.33
LSMEM1Q8N8F7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.08■□□□□ 0.33
LSMEM1Q8N8F7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSMEM1Q8N8F7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSMEM1Q8N8F7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSMEM1Q8N8F7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LSMEM1Q8N8F7 AC126763.1-201ENST00000552015 2118 ntBASIC17.08■□□□□ 0.33
LSMEM1Q8N8F7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LSMEM1Q8N8F7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.08■□□□□ 0.33
LSMEM1Q8N8F7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSMEM1Q8N8F7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSMEM1Q8N8F7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
LSMEM1Q8N8F7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.08■□□□□ 0.33
LSMEM1Q8N8F7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 TNRC18P3-201ENST00000441896 2691 ntBASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.08■□□□□ 0.32
LSMEM1Q8N8F7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 MFAP1P1-201ENST00000442257 1255 ntBASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.07■□□□□ 0.32
LSMEM1Q8N8F7 AL499627.1-201ENST00000569373 2188 ntBASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 KRT18P41-201ENST00000518924 1277 ntBASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 SLC25A1P4-201ENST00000567977 778 ntBASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 REXO1L10P-201ENST00000615707 1290 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms