Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39CQ8N584 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TTC39CQ8N584 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39CQ8N584 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.81■□□□□ 0.76
TTC39CQ8N584 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39CQ8N584 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39CQ8N584 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39CQ8N584 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.81■□□□□ 0.76
TTC39CQ8N584 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39CQ8N584 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
TTC39CQ8N584 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39CQ8N584 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TTC39CQ8N584 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
TTC39CQ8N584 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39CQ8N584 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39CQ8N584 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.81■□□□□ 0.76
TTC39CQ8N584 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39CQ8N584 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TTC39CQ8N584 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
TTC39CQ8N584 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.81■□□□□ 0.76
TTC39CQ8N584 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TTC39CQ8N584 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.81■□□□□ 0.76
TTC39CQ8N584 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.81■□□□□ 0.76
TTC39CQ8N584 KRT8P50-201ENST00000562022 1438 ntBASIC19.81■□□□□ 0.76
TTC39CQ8N584 MYLKP1-201ENST00000509077 1580 ntBASIC19.81■□□□□ 0.76
TTC39CQ8N584 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.81■□□□□ 0.76
TTC39CQ8N584 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39CQ8N584 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TTC39CQ8N584 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39CQ8N584 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.81■□□□□ 0.76
TTC39CQ8N584 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39CQ8N584 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39CQ8N584 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39CQ8N584 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39CQ8N584 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.8■□□□□ 0.76
TTC39CQ8N584 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 AC093503.3-201ENST00000624917 2352 ntBASIC19.8■□□□□ 0.76
TTC39CQ8N584 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39CQ8N584 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.8■□□□□ 0.76
TTC39CQ8N584 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39CQ8N584 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39CQ8N584 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39CQ8N584 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39CQ8N584 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39CQ8N584 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TTC39CQ8N584 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.79■□□□□ 0.76
TTC39CQ8N584 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39CQ8N584 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.79■□□□□ 0.76
TTC39CQ8N584 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39CQ8N584 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.79■□□□□ 0.76
TTC39CQ8N584 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39CQ8N584 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.79■□□□□ 0.76
TTC39CQ8N584 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39CQ8N584 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.79■□□□□ 0.76
TTC39CQ8N584 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39CQ8N584 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TTC39CQ8N584 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39CQ8N584 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39CQ8N584 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39CQ8N584 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TTC39CQ8N584 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39CQ8N584 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39CQ8N584 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TTC39CQ8N584 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39CQ8N584 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.78■□□□□ 0.76
TTC39CQ8N584 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39CQ8N584 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.78■□□□□ 0.76
TTC39CQ8N584 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39CQ8N584 AC034232.1-201ENST00000506026 1064 ntBASIC19.78■□□□□ 0.76
TTC39CQ8N584 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.78■□□□□ 0.76
TTC39CQ8N584 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39CQ8N584 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.78■□□□□ 0.76
TTC39CQ8N584 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.78■□□□□ 0.76
TTC39CQ8N584 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39CQ8N584 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39CQ8N584 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.78■□□□□ 0.76
TTC39CQ8N584 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39CQ8N584 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39CQ8N584 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.78■□□□□ 0.76
TTC39CQ8N584 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TTC39CQ8N584 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.77■□□□□ 0.76
TTC39CQ8N584 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.77■□□□□ 0.76
TTC39CQ8N584 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39CQ8N584 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39CQ8N584 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms