Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 AC024243.1-201ENST00000609234 778 ntBASIC17.3■□□□□ 0.36
BEST3Q8N1M1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST3Q8N1M1 IER3-202ENST00000376377 1350 ntBASIC17.29■□□□□ 0.36
BEST3Q8N1M1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 IRX1P1-201ENST00000438849 1838 ntBASIC17.29■□□□□ 0.36
BEST3Q8N1M1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
BEST3Q8N1M1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 RCC2P3-201ENST00000418112 1537 ntBASIC17.28■□□□□ 0.36
BEST3Q8N1M1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 FEM1AP3-201ENST00000403722 1741 ntBASIC17.28■□□□□ 0.36
BEST3Q8N1M1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 VENTXP5-201ENST00000523979 775 ntBASIC17.28■□□□□ 0.36
BEST3Q8N1M1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 AC083849.1-201ENST00000615227 514 ntBASIC17.28■□□□□ 0.36
BEST3Q8N1M1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 LINC01311-201ENST00000565162 1445 ntBASIC17.28■□□□□ 0.36
BEST3Q8N1M1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BEST3Q8N1M1 AL512353.2-201ENST00000448759 1962 ntBASIC17.28■□□□□ 0.36
BEST3Q8N1M1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
BEST3Q8N1M1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BEST3Q8N1M1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.27■□□□□ 0.36
BEST3Q8N1M1 AC005332.1-201ENST00000577698 1310 ntBASIC17.27■□□□□ 0.36
BEST3Q8N1M1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
BEST3Q8N1M1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BEST3Q8N1M1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.27■□□□□ 0.36
BEST3Q8N1M1 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.27■□□□□ 0.36
BEST3Q8N1M1 AC141586.3-201ENST00000562166 1838 ntBASIC17.27■□□□□ 0.36
BEST3Q8N1M1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms