Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC23.37■■□□□ 1.33
COL23A1Q86Y22 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 TEX21P-204ENST00000641479 1693 ntBASIC23.36■■□□□ 1.33
COL23A1Q86Y22 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 RPS2P1-201ENST00000434010 821 ntBASIC23.36■■□□□ 1.33
COL23A1Q86Y22 AL591424.1-201ENST00000442569 1213 ntBASIC23.36■■□□□ 1.33
COL23A1Q86Y22 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 AC012640.2-201ENST00000561606 901 ntBASIC23.36■■□□□ 1.33
COL23A1Q86Y22 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 AC134684.3-201ENST00000641758 218 ntBASIC23.36■■□□□ 1.33
COL23A1Q86Y22 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL23A1Q86Y22 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 GZMM-202ENST00000592501 941 ntTSL 3 BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 AC099778.1-201ENST00000568593 1911 ntBASIC23.35■■□□□ 1.33
COL23A1Q86Y22 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL23A1Q86Y22 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 AC092910.1-201ENST00000482027 1129 ntBASIC23.34■■□□□ 1.33
COL23A1Q86Y22 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 COX5A-204ENST00000567270 579 ntTSL 3 BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.34■■□□□ 1.33
COL23A1Q86Y22 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 RNA5SP415-201ENST00000517246 115 ntBASIC23.33■■□□□ 1.33
COL23A1Q86Y22 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 SART3-203ENST00000546611 1184 ntBASIC23.33■■□□□ 1.33
COL23A1Q86Y22 MIR3687-2-201ENST00000577708 61 ntBASIC23.33■■□□□ 1.33
COL23A1Q86Y22 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 Z83851.2-201ENST00000609564 659 ntBASIC23.33■■□□□ 1.33
COL23A1Q86Y22 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 MIR3687-1-201ENST00000614492 61 ntBASIC23.33■■□□□ 1.33
COL23A1Q86Y22 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL23A1Q86Y22 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.33■■□□□ 1.32
COL23A1Q86Y22 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL23A1Q86Y22 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
COL23A1Q86Y22 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms