Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC28Q86X40 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRRC28Q86X40 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC28Q86X40 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC28Q86X40 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC28Q86X40 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC28Q86X40 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC28Q86X40 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC28Q86X40 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC28Q86X40 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC28Q86X40 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC28Q86X40 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC28Q86X40 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRC28Q86X40 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC28Q86X40 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRC28Q86X40 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC28Q86X40 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC28Q86X40 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC28Q86X40 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC28Q86X40 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.6■□□□□ 0.25
LRRC28Q86X40 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC28Q86X40 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC28Q86X40 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LRRC28Q86X40 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC28Q86X40 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC28Q86X40 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC28Q86X40 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC28Q86X40 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC28Q86X40 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC28Q86X40 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LRRC28Q86X40 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC28Q86X40 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC28Q86X40 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LRRC28Q86X40 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRRC28Q86X40 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC28Q86X40 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC28Q86X40 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRC28Q86X40 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC28Q86X40 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC28Q86X40 AC083906.6-201ENST00000641366 219 ntBASIC16.59■□□□□ 0.25
LRRC28Q86X40 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRRC28Q86X40 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRC28Q86X40 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LRRC28Q86X40 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRC28Q86X40 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 AC116351.2-201ENST00000606540 1585 ntBASIC16.59■□□□□ 0.25
LRRC28Q86X40 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRRC28Q86X40 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC28Q86X40 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.58■□□□□ 0.25
LRRC28Q86X40 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRC28Q86X40 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.58■□□□□ 0.25
LRRC28Q86X40 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LRRC28Q86X40 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRC28Q86X40 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
LRRC28Q86X40 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRC28Q86X40 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LRRC28Q86X40 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC28Q86X40 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC28Q86X40 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC28Q86X40 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.58■□□□□ 0.24
LRRC28Q86X40 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC28Q86X40 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC28Q86X40 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
LRRC28Q86X40 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
LRRC28Q86X40 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC28Q86X40 AC008550.1-201ENST00000511500 884 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms