Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 AC233702.3-201ENST00000578656 1387 ntBASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 AC009065.1-201ENST00000564055 1225 ntBASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 FP475955.4-201ENST00000623131 1990 ntBASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 AC018712.1-201ENST00000455767 687 ntBASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 RPL13AP23-201ENST00000480739 586 ntBASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 AC104819.1-201ENST00000504587 486 ntBASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 MIR5100-201ENST00000579544 119 ntBASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC11.5□□□□□ -0.57
VPS13BQ7Z7G8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 DDT-203ENST00000403754 569 ntTSL 3 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 MIR3180-5-201ENST00000583743 153 ntBASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 AL109659.2-201ENST00000606809 1674 ntBASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 AC098831.1-202ENST00000438821 336 ntBASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 AC099336.1-202ENST00000602961 463 ntBASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 GPX1P2-201ENST00000429271 606 ntBASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 IGHV3-22-201ENST00000520721 359 ntBASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms