Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 AC233263.1-201ENST00000578059 224 ntBASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 AC110285.5-201ENST00000611501 352 ntBASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 AC131212.4-201ENST00000623606 975 ntBASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
MRPL55Q7Z7F7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 AC090164.3-201ENST00000610780 2143 ntBASIC12□□□□□ -0.49
MRPL55Q7Z7F7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms