Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 LINC00167-201ENST00000530583 1419 ntBASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.89■□□□□ 0.13
RAI1Q7Z5J4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 FAAHP1-202ENST00000446499 1238 ntBASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 AC233702.3-201ENST00000578656 1387 ntBASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 AC104692.2-201ENST00000603054 253 ntBASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 AL671883.3-201ENST00000603274 991 ntBASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 AC023511.2-201ENST00000618803 211 ntBASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.88■□□□□ 0.13
RAI1Q7Z5J4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 AL390719.2-201ENST00000606993 987 ntBASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 AC008556.1-201ENST00000610908 2040 ntBASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAI1Q7Z5J4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 AL512353.2-201ENST00000448759 1962 ntBASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms