Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 AL391807.1-203ENST00000604392 2365 ntBASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
SWSAP1Q6NVH7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.75■□□□□ 0.91
SWSAP1Q6NVH7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 HLA-F-220ENST00000434407 884 ntBASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 AL136038.4-201ENST00000603606 1261 ntBASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.74■□□□□ 0.91
SWSAP1Q6NVH7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 KRT8P50-201ENST00000562022 1438 ntBASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 AL645929.1-201ENST00000420084 975 ntBASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SWSAP1Q6NVH7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SWSAP1Q6NVH7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SWSAP1Q6NVH7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SWSAP1Q6NVH7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SWSAP1Q6NVH7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SWSAP1Q6NVH7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SWSAP1Q6NVH7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.72■□□□□ 0.91
SWSAP1Q6NVH7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.72■□□□□ 0.91
SWSAP1Q6NVH7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SWSAP1Q6NVH7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.72■□□□□ 0.91
SWSAP1Q6NVH7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SWSAP1Q6NVH7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SWSAP1Q6NVH7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SWSAP1Q6NVH7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.72■□□□□ 0.91
SWSAP1Q6NVH7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SWSAP1Q6NVH7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms