Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 KRT18P57-201ENST00000443599 1254 ntBASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 AC008622.2-201ENST00000617006 1229 ntBASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 AL138966.2-201ENST00000621997 464 ntBASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39BQ5VTQ0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 AP000523.1-201ENST00000398242 1049 ntBASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 BX664615.1-201ENST00000443558 458 ntBASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 MIR4674-201ENST00000582457 87 ntBASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC39BQ5VTQ0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
TTC39BQ5VTQ0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TTC39BQ5VTQ0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TTC39BQ5VTQ0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
TTC39BQ5VTQ0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TTC39BQ5VTQ0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 AC138932.1-201ENST00000534164 6830 ntBASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 MCCD1P1-208ENST00000445732 328 ntBASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 WWOX-216ENST00000569818 525 ntBASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms