Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AL137013.1-201ENST00000432946 1228 ntBASIC18.56■□□□□ 0.56
LDLRAP1Q5SW96 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.56■□□□□ 0.56
LDLRAP1Q5SW96 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDLRAP1Q5SW96 ATP5G1P1-201ENST00000448724 379 ntBASIC18.56■□□□□ 0.56
LDLRAP1Q5SW96 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.56■□□□□ 0.56
LDLRAP1Q5SW96 WWOX-216ENST00000569818 525 ntBASIC18.56■□□□□ 0.56
LDLRAP1Q5SW96 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LDLRAP1Q5SW96 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LDLRAP1Q5SW96 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDLRAP1Q5SW96 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
LDLRAP1Q5SW96 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.56■□□□□ 0.56
LDLRAP1Q5SW96 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDLRAP1Q5SW96 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.56■□□□□ 0.56
LDLRAP1Q5SW96 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 AC007613.1-201ENST00000572811 2597 ntBASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 FZD10-202ENST00000539839 3282 ntBASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 CR769767.2-201ENST00000622735 460 ntBASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 KRT8P45-201ENST00000414328 1447 ntBASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LDLRAP1Q5SW96 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 AC008556.1-201ENST00000610908 2040 ntBASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 TERF1P1-201ENST00000311003 1181 ntBASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 AC005332.8-201ENST00000622750 2735 ntBASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LDLRAP1Q5SW96 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 AC036111.1-201ENST00000533973 1582 ntBASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
LDLRAP1Q5SW96 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.52■□□□□ 0.56
LDLRAP1Q5SW96 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.52■□□□□ 0.56
LDLRAP1Q5SW96 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms