Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNFT1Q5M7Z0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.78■□□□□ 0.28
RNFT1Q5M7Z0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNFT1Q5M7Z0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.78■□□□□ 0.28
RNFT1Q5M7Z0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.78■□□□□ 0.28
RNFT1Q5M7Z0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.78■□□□□ 0.28
RNFT1Q5M7Z0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.78■□□□□ 0.28
RNFT1Q5M7Z0 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.78■□□□□ 0.28
RNFT1Q5M7Z0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNFT1Q5M7Z0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.78■□□□□ 0.28
RNFT1Q5M7Z0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RNFT1Q5M7Z0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RNFT1Q5M7Z0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.78■□□□□ 0.28
RNFT1Q5M7Z0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNFT1Q5M7Z0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 AL049812.1-201ENST00000432563 2267 ntBASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 Z98044.1-201ENST00000632503 1764 ntBASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 PVRIG2P-201ENST00000435460 978 ntBASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 HEIH-201ENST00000623091 1652 ntBASIC16.77■□□□□ 0.28
RNFT1Q5M7Z0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RNFT1Q5M7Z0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RNFT1Q5M7Z0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNFT1Q5M7Z0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RNFT1Q5M7Z0 Z83836.1-201ENST00000624605 1642 ntBASIC16.77■□□□□ 0.27
RNFT1Q5M7Z0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNFT1Q5M7Z0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.77■□□□□ 0.27
RNFT1Q5M7Z0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RNFT1Q5M7Z0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.77■□□□□ 0.27
RNFT1Q5M7Z0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.77■□□□□ 0.27
RNFT1Q5M7Z0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNFT1Q5M7Z0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 AC005332.3-201ENST00000589904 676 ntBASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 AL161938.1-201ENST00000569833 2180 ntBASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RNFT1Q5M7Z0 MTMR9LP-203ENST00000426597 1545 ntBASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 KRT18P1-202ENST00000452408 1331 ntBASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 MIR3180-4-201ENST00000582223 153 ntBASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms