Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
H3F3AP84243 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.66■□□□□ 0.26
H3F3AP84243 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.66■□□□□ 0.26
H3F3AP84243 NEK4P2-201ENST00000580004 1012 ntBASIC16.66■□□□□ 0.26
H3F3AP84243 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.66■□□□□ 0.26
H3F3AP84243 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.66■□□□□ 0.26
H3F3AP84243 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.66■□□□□ 0.26
H3F3AP84243 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3AP84243 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.66■□□□□ 0.26
H3F3AP84243 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3AP84243 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3AP84243 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.66■□□□□ 0.26
H3F3AP84243 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
H3F3AP84243 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3AP84243 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3AP84243 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.65■□□□□ 0.26
H3F3AP84243 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
H3F3AP84243 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
H3F3AP84243 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 TERF1P1-201ENST00000311003 1181 ntBASIC16.65■□□□□ 0.26
H3F3AP84243 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.65■□□□□ 0.26
H3F3AP84243 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.65■□□□□ 0.26
H3F3AP84243 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.65■□□□□ 0.26
H3F3AP84243 AC010203.1-204ENST00000548782 407 ntBASIC16.65■□□□□ 0.26
H3F3AP84243 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
H3F3AP84243 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.65■□□□□ 0.26
H3F3AP84243 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
H3F3AP84243 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
H3F3AP84243 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3AP84243 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
H3F3AP84243 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
H3F3AP84243 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
H3F3AP84243 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H3F3AP84243 AC112777.1-201ENST00000540175 1423 ntBASIC16.64■□□□□ 0.25
H3F3AP84243 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.64■□□□□ 0.25
H3F3AP84243 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H3F3AP84243 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.64■□□□□ 0.25
H3F3AP84243 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H3F3AP84243 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
H3F3AP84243 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H3F3AP84243 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.64■□□□□ 0.25
H3F3AP84243 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.64■□□□□ 0.25
H3F3AP84243 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
H3F3AP84243 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.64■□□□□ 0.25
H3F3AP84243 AC141257.4-201ENST00000634557 245 ntBASIC16.64■□□□□ 0.25
H3F3AP84243 AC136944.6-201ENST00000634818 245 ntBASIC16.64■□□□□ 0.25
H3F3AP84243 MYC-208ENST00000641036 567 ntBASIC16.64■□□□□ 0.25
H3F3AP84243 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
H3F3AP84243 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H3F3AP84243 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H3F3AP84243 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H3F3AP84243 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H3F3AP84243 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
H3F3AP84243 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H3F3AP84243 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.64■□□□□ 0.25
H3F3AP84243 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H3F3AP84243 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
H3F3AP84243 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H3F3AP84243 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
H3F3AP84243 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H3F3AP84243 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.63■□□□□ 0.25
H3F3AP84243 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H3F3AP84243 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.63■□□□□ 0.25
H3F3AP84243 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.63■□□□□ 0.25
H3F3AP84243 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H3F3AP84243 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H3F3AP84243 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H3F3AP84243 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H3F3AP84243 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.63■□□□□ 0.25
H3F3AP84243 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
H3F3AP84243 AL499627.1-201ENST00000569373 2188 ntBASIC16.63■□□□□ 0.25
H3F3AP84243 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H3F3AP84243 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H3F3AP84243 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.63■□□□□ 0.25
H3F3AP84243 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H3F3AP84243 AL137013.1-201ENST00000432946 1228 ntBASIC16.63■□□□□ 0.25
H3F3AP84243 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
H3F3AP84243 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.63■□□□□ 0.25
H3F3AP84243 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H3F3AP84243 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
H3F3AP84243 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.63■□□□□ 0.25
H3F3AP84243 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H3F3AP84243 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms