Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.86■□□□□ 0.29
RPS4XP62701 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RPS4XP62701 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4XP62701 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
RPS4XP62701 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4XP62701 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.86■□□□□ 0.29
RPS4XP62701 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.85■□□□□ 0.29
RPS4XP62701 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RPS4XP62701 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.85■□□□□ 0.29
RPS4XP62701 AL162741.1-201ENST00000565563 1558 ntBASIC16.85■□□□□ 0.29
RPS4XP62701 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.85■□□□□ 0.29
RPS4XP62701 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.85■□□□□ 0.29
RPS4XP62701 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
RPS4XP62701 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
RPS4XP62701 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RPS4XP62701 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RPS4XP62701 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.85■□□□□ 0.29
RPS4XP62701 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 AC092865.7-201ENST00000641832 219 ntBASIC16.85■□□□□ 0.29
RPS4XP62701 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.85■□□□□ 0.29
RPS4XP62701 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RPS4XP62701 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.85■□□□□ 0.29
RPS4XP62701 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 AIRN-201ENST00000601203 4374 ntBASIC16.85■□□□□ 0.29
RPS4XP62701 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.85■□□□□ 0.29
RPS4XP62701 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
RPS4XP62701 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RPS4XP62701 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4XP62701 AC007613.1-201ENST00000572811 2597 ntBASIC16.84■□□□□ 0.29
RPS4XP62701 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4XP62701 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.84■□□□□ 0.29
RPS4XP62701 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RPS4XP62701 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4XP62701 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4XP62701 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4XP62701 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.84■□□□□ 0.29
RPS4XP62701 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4XP62701 AC116562.2-201ENST00000507042 360 ntBASIC16.84■□□□□ 0.29
RPS4XP62701 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.84■□□□□ 0.29
RPS4XP62701 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.84■□□□□ 0.29
RPS4XP62701 DGCR10-201ENST00000609839 495 ntBASIC16.84■□□□□ 0.29
RPS4XP62701 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RPS4XP62701 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4XP62701 LINC01568-207ENST00000641790 1380 ntBASIC16.84■□□□□ 0.29
RPS4XP62701 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RPS4XP62701 AC112777.1-201ENST00000540175 1423 ntBASIC16.84■□□□□ 0.29
RPS4XP62701 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4XP62701 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4XP62701 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4XP62701 AL109659.2-201ENST00000606809 1674 ntBASIC16.84■□□□□ 0.29
RPS4XP62701 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4XP62701 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4XP62701 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4XP62701 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4XP62701 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4XP62701 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4XP62701 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RPS4XP62701 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
RPS4XP62701 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RPS4XP62701 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RPS4XP62701 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RPS4XP62701 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4XP62701 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4XP62701 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4XP62701 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4XP62701 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4XP62701 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RPS4XP62701 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4XP62701 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RPS4XP62701 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.83■□□□□ 0.28
RPS4XP62701 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.83■□□□□ 0.28
RPS4XP62701 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.83■□□□□ 0.28
RPS4XP62701 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4XP62701 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4XP62701 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4XP62701 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.83■□□□□ 0.28
RPS4XP62701 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.83■□□□□ 0.28
RPS4XP62701 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4XP62701 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4XP62701 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
RPS4XP62701 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4XP62701 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
RPS4XP62701 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.83■□□□□ 0.28
RPS4XP62701 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.82■□□□□ 0.28
RPS4XP62701 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RPS4XP62701 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms