Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC003957.1-201ENST00000625108 2673 ntBASIC19.48■□□□□ 0.71
EPHB3P54753 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
EPHB3P54753 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EPHB3P54753 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
EPHB3P54753 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
EPHB3P54753 Z98044.1-201ENST00000632503 1764 ntBASIC19.47■□□□□ 0.71
EPHB3P54753 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.47■□□□□ 0.71
EPHB3P54753 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EPHB3P54753 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.47■□□□□ 0.71
EPHB3P54753 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
EPHB3P54753 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.47■□□□□ 0.71
EPHB3P54753 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.47■□□□□ 0.71
EPHB3P54753 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.47■□□□□ 0.71
EPHB3P54753 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EPHB3P54753 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
EPHB3P54753 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.47■□□□□ 0.71
EPHB3P54753 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.47■□□□□ 0.71
EPHB3P54753 AP003733.1-201ENST00000491725 852 ntBASIC19.47■□□□□ 0.71
EPHB3P54753 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.47■□□□□ 0.71
EPHB3P54753 RNF126P1-202ENST00000569893 925 ntBASIC19.47■□□□□ 0.71
EPHB3P54753 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.47■□□□□ 0.71
EPHB3P54753 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.47■□□□□ 0.71
EPHB3P54753 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EPHB3P54753 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EPHB3P54753 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.47■□□□□ 0.71
EPHB3P54753 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
EPHB3P54753 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EPHB3P54753 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EPHB3P54753 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
EPHB3P54753 KRT18P1-202ENST00000452408 1331 ntBASIC19.47■□□□□ 0.71
EPHB3P54753 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
EPHB3P54753 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EPHB3P54753 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
EPHB3P54753 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.47■□□□□ 0.71
EPHB3P54753 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EPHB3P54753 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EPHB3P54753 HEIH-201ENST00000623091 1652 ntBASIC19.46■□□□□ 0.71
EPHB3P54753 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EPHB3P54753 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
EPHB3P54753 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EPHB3P54753 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EPHB3P54753 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.46■□□□□ 0.71
EPHB3P54753 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.46■□□□□ 0.71
EPHB3P54753 TPM4P1-201ENST00000436100 807 ntBASIC19.46■□□□□ 0.71
EPHB3P54753 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.46■□□□□ 0.71
EPHB3P54753 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
EPHB3P54753 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.46■□□□□ 0.71
EPHB3P54753 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EPHB3P54753 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
EPHB3P54753 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EPHB3P54753 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.46■□□□□ 0.71
EPHB3P54753 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
EPHB3P54753 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EPHB3P54753 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EPHB3P54753 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
EPHB3P54753 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.46■□□□□ 0.71
EPHB3P54753 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
EPHB3P54753 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.46■□□□□ 0.71
EPHB3P54753 AL357033.4-201ENST00000617703 1807 ntBASIC19.46■□□□□ 0.71
EPHB3P54753 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EPHB3P54753 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
EPHB3P54753 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.45■□□□□ 0.7
EPHB3P54753 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EPHB3P54753 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.45■□□□□ 0.7
EPHB3P54753 Z83836.1-201ENST00000624605 1642 ntBASIC19.45■□□□□ 0.7
EPHB3P54753 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EPHB3P54753 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.45■□□□□ 0.7
EPHB3P54753 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.45■□□□□ 0.7
EPHB3P54753 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.45■□□□□ 0.7
EPHB3P54753 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EPHB3P54753 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.45■□□□□ 0.7
EPHB3P54753 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
EPHB3P54753 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EPHB3P54753 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EPHB3P54753 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
EPHB3P54753 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EPHB3P54753 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.45■□□□□ 0.7
EPHB3P54753 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.45■□□□□ 0.7
EPHB3P54753 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.45■□□□□ 0.7
EPHB3P54753 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EPHB3P54753 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EPHB3P54753 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.45■□□□□ 0.7
EPHB3P54753 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.44■□□□□ 0.7
EPHB3P54753 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EPHB3P54753 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EPHB3P54753 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
EPHB3P54753 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EPHB3P54753 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EPHB3P54753 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EPHB3P54753 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.44■□□□□ 0.7
EPHB3P54753 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
EPHB3P54753 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.44■□□□□ 0.7
EPHB3P54753 AC005332.3-201ENST00000589904 676 ntBASIC19.44■□□□□ 0.7
EPHB3P54753 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.44■□□□□ 0.7
EPHB3P54753 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.44■□□□□ 0.7
EPHB3P54753 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.44■□□□□ 0.7
EPHB3P54753 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
EPHB3P54753 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.43■□□□□ 0.7
EPHB3P54753 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.43■□□□□ 0.7
EPHB3P54753 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms