Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 AL139384.1-201ENST00000612143 3047 ntBASIC18.06■□□□□ 0.48
CLCN2P51788 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN2P51788 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCN2P51788 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN2P51788 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCN2P51788 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN2P51788 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN2P51788 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CLCN2P51788 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN2P51788 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLCN2P51788 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN2P51788 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN2P51788 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CLCN2P51788 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN2P51788 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.05■□□□□ 0.48
CLCN2P51788 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN2P51788 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CLCN2P51788 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.05■□□□□ 0.48
CLCN2P51788 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.05■□□□□ 0.48
CLCN2P51788 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CLCN2P51788 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN2P51788 AC026271.3-201ENST00000571884 352 ntBASIC18.05■□□□□ 0.48
CLCN2P51788 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN2P51788 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.05■□□□□ 0.48
CLCN2P51788 HLA-A-209ENST00000638375 975 ntBASIC18.05■□□□□ 0.48
CLCN2P51788 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.05■□□□□ 0.48
CLCN2P51788 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.05■□□□□ 0.48
CLCN2P51788 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN2P51788 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN2P51788 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.05■□□□□ 0.48
CLCN2P51788 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN2P51788 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
CLCN2P51788 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN2P51788 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.05■□□□□ 0.48
CLCN2P51788 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN2P51788 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLCN2P51788 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLCN2P51788 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
CLCN2P51788 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLCN2P51788 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.04■□□□□ 0.48
CLCN2P51788 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.04■□□□□ 0.48
CLCN2P51788 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.04■□□□□ 0.48
CLCN2P51788 AL355075.4-201ENST00000554988 638 ntBASIC18.04■□□□□ 0.48
CLCN2P51788 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCN2P51788 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.04■□□□□ 0.48
CLCN2P51788 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCN2P51788 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLCN2P51788 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN2P51788 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.03■□□□□ 0.48
CLCN2P51788 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN2P51788 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
CLCN2P51788 AC009053.2-201ENST00000563701 2365 ntBASIC18.03■□□□□ 0.48
CLCN2P51788 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN2P51788 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCN2P51788 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN2P51788 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN2P51788 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCN2P51788 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN2P51788 AC004980.1-204ENST00000429707 299 ntBASIC18.03■□□□□ 0.48
CLCN2P51788 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN2P51788 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.03■□□□□ 0.48
CLCN2P51788 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.03■□□□□ 0.48
CLCN2P51788 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CLCN2P51788 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.03■□□□□ 0.48
CLCN2P51788 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CLCN2P51788 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN2P51788 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN2P51788 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CLCN2P51788 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN2P51788 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.03■□□□□ 0.48
CLCN2P51788 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN2P51788 ESPNP-201ENST00000270691 2015 ntBASIC18.03■□□□□ 0.48
CLCN2P51788 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN2P51788 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN2P51788 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN2P51788 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN2P51788 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN2P51788 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN2P51788 AL512353.2-201ENST00000448759 1962 ntBASIC18.02■□□□□ 0.48
CLCN2P51788 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN2P51788 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms