Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRCA2P51587 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRCA2P51587 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.83■□□□□ 0.93
BRCA2P51587 KRT18P3-201ENST00000451602 1288 ntBASIC20.83■□□□□ 0.93
BRCA2P51587 MIR3687-2-201ENST00000577708 61 ntBASIC20.83■□□□□ 0.93
BRCA2P51587 MIR3687-1-201ENST00000614492 61 ntBASIC20.83■□□□□ 0.93
BRCA2P51587 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRCA2P51587 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRCA2P51587 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BRCA2P51587 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.83■□□□□ 0.92
BRCA2P51587 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
BRCA2P51587 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.92
BRCA2P51587 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BRCA2P51587 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BRCA2P51587 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BRCA2P51587 HOXB1-202ENST00000577092 1414 ntBASIC20.83■□□□□ 0.92
BRCA2P51587 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
BRCA2P51587 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BRCA2P51587 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRCA2P51587 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRCA2P51587 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BRCA2P51587 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.82■□□□□ 0.92
BRCA2P51587 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
BRCA2P51587 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.82■□□□□ 0.92
BRCA2P51587 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BRCA2P51587 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.82■□□□□ 0.92
BRCA2P51587 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.82■□□□□ 0.92
BRCA2P51587 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BRCA2P51587 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.82■□□□□ 0.92
BRCA2P51587 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.82■□□□□ 0.92
BRCA2P51587 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BRCA2P51587 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.82■□□□□ 0.92
BRCA2P51587 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.82■□□□□ 0.92
BRCA2P51587 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.82■□□□□ 0.92
BRCA2P51587 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRCA2P51587 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BRCA2P51587 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BRCA2P51587 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.82■□□□□ 0.92
BRCA2P51587 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.82■□□□□ 0.92
BRCA2P51587 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.82■□□□□ 0.92
BRCA2P51587 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
BRCA2P51587 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRCA2P51587 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.82■□□□□ 0.92
BRCA2P51587 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
BRCA2P51587 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.82■□□□□ 0.92
BRCA2P51587 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRCA2P51587 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRCA2P51587 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BRCA2P51587 METTL21AP1-201ENST00000438852 635 ntBASIC20.82■□□□□ 0.92
BRCA2P51587 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.82■□□□□ 0.92
BRCA2P51587 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.82■□□□□ 0.92
BRCA2P51587 SPCS2P1-201ENST00000561636 679 ntBASIC20.82■□□□□ 0.92
BRCA2P51587 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.82■□□□□ 0.92
BRCA2P51587 MIR5100-201ENST00000579544 119 ntBASIC20.82■□□□□ 0.92
BRCA2P51587 AC005336.2-201ENST00000593183 939 ntBASIC20.82■□□□□ 0.92
BRCA2P51587 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRCA2P51587 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
BRCA2P51587 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.81■□□□□ 0.92
BRCA2P51587 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.81■□□□□ 0.92
BRCA2P51587 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.81■□□□□ 0.92
BRCA2P51587 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BRCA2P51587 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCA2P51587 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCA2P51587 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCA2P51587 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.81■□□□□ 0.92
BRCA2P51587 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
BRCA2P51587 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCA2P51587 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCA2P51587 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
BRCA2P51587 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCA2P51587 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.81■□□□□ 0.92
BRCA2P51587 AC004832.2-201ENST00000426397 482 ntBASIC20.81■□□□□ 0.92
BRCA2P51587 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCA2P51587 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRCA2P51587 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BRCA2P51587 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BRCA2P51587 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.8■□□□□ 0.92
BRCA2P51587 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRCA2P51587 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRCA2P51587 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
BRCA2P51587 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.8■□□□□ 0.92
BRCA2P51587 AL162377.1-201ENST00000618844 1793 ntBASIC20.8■□□□□ 0.92
BRCA2P51587 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.8■□□□□ 0.92
BRCA2P51587 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.8■□□□□ 0.92
BRCA2P51587 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRCA2P51587 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRCA2P51587 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRCA2P51587 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.79■□□□□ 0.92
BRCA2P51587 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.79■□□□□ 0.92
BRCA2P51587 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
BRCA2P51587 VENTXP7-201ENST00000475503 772 ntBASIC20.79■□□□□ 0.92
BRCA2P51587 AC025062.2-201ENST00000605477 670 ntBASIC20.79■□□□□ 0.92
BRCA2P51587 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.79■□□□□ 0.92
BRCA2P51587 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BRCA2P51587 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.79■□□□□ 0.92
BRCA2P51587 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BRCA2P51587 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.79■□□□□ 0.92
BRCA2P51587 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.79■□□□□ 0.92
BRCA2P51587 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BRCA2P51587 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms