Protein–RNA interactions for Protein: P49918

CDKN1C, Cyclin-dependent kinase inhibitor 1C, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1CP49918 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1CP49918 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1CP49918 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1CP49918 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1CP49918 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.53■□□□□ 0.56
CDKN1CP49918 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.53■□□□□ 0.56
CDKN1CP49918 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CDKN1CP49918 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CDKN1CP49918 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1CP49918 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CDKN1CP49918 AC128688.1-201ENST00000487626 519 ntBASIC18.53■□□□□ 0.56
CDKN1CP49918 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1CP49918 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.53■□□□□ 0.56
CDKN1CP49918 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.53■□□□□ 0.56
CDKN1CP49918 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.53■□□□□ 0.56
CDKN1CP49918 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CDKN1CP49918 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1CP49918 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1CP49918 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1CP49918 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.53■□□□□ 0.56
CDKN1CP49918 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.53■□□□□ 0.56
CDKN1CP49918 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1CP49918 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1CP49918 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1CP49918 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1CP49918 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1CP49918 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.53■□□□□ 0.56
CDKN1CP49918 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN1CP49918 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN1CP49918 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CDKN1CP49918 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.52■□□□□ 0.56
CDKN1CP49918 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.52■□□□□ 0.56
CDKN1CP49918 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.52■□□□□ 0.56
CDKN1CP49918 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN1CP49918 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.52■□□□□ 0.56
CDKN1CP49918 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN1CP49918 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN1CP49918 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN1CP49918 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.52■□□□□ 0.56
CDKN1CP49918 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.52■□□□□ 0.56
CDKN1CP49918 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN1CP49918 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.52■□□□□ 0.56
CDKN1CP49918 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.52■□□□□ 0.56
CDKN1CP49918 AC145285.6-201ENST00000604632 637 ntBASIC18.52■□□□□ 0.56
CDKN1CP49918 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CDKN1CP49918 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN1CP49918 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.52■□□□□ 0.56
CDKN1CP49918 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN1CP49918 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDKN1CP49918 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDKN1CP49918 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.52■□□□□ 0.55
CDKN1CP49918 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDKN1CP49918 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDKN1CP49918 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.51■□□□□ 0.55
CDKN1CP49918 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.51■□□□□ 0.55
CDKN1CP49918 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.51■□□□□ 0.55
CDKN1CP49918 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.51■□□□□ 0.55
CDKN1CP49918 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.51■□□□□ 0.55
CDKN1CP49918 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.51■□□□□ 0.55
CDKN1CP49918 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.51■□□□□ 0.55
CDKN1CP49918 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.51■□□□□ 0.55
CDKN1CP49918 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CDKN1CP49918 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 AC012306.2-201ENST00000609350 630 ntBASIC18.51■□□□□ 0.55
CDKN1CP49918 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.51■□□□□ 0.55
CDKN1CP49918 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDKN1CP49918 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.51■□□□□ 0.55
CDKN1CP49918 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CDKN1CP49918 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDKN1CP49918 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN1CP49918 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.51■□□□□ 0.55
CDKN1CP49918 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN1CP49918 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN1CP49918 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.5■□□□□ 0.55
CDKN1CP49918 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN1CP49918 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.5■□□□□ 0.55
CDKN1CP49918 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN1CP49918 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN1CP49918 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN1CP49918 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CDKN1CP49918 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CDKN1CP49918 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CDKN1CP49918 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN1CP49918 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms