Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF4P48230 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF4P48230 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF4P48230 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF4P48230 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
TM4SF4P48230 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF4P48230 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF4P48230 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.25■□□□□ 0.99
TM4SF4P48230 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.25■□□□□ 0.99
TM4SF4P48230 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.25■□□□□ 0.99
TM4SF4P48230 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.25■□□□□ 0.99
TM4SF4P48230 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.25■□□□□ 0.99
TM4SF4P48230 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.25■□□□□ 0.99
TM4SF4P48230 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.25■□□□□ 0.99
TM4SF4P48230 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.25■□□□□ 0.99
TM4SF4P48230 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF4P48230 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TM4SF4P48230 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TM4SF4P48230 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF4P48230 TEX21P-204ENST00000641479 1693 ntBASIC21.24■□□□□ 0.99
TM4SF4P48230 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TM4SF4P48230 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TM4SF4P48230 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF4P48230 AC012676.1-201ENST00000574705 1949 ntBASIC21.24■□□□□ 0.99
TM4SF4P48230 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.24■□□□□ 0.99
TM4SF4P48230 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF4P48230 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF4P48230 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF4P48230 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TM4SF4P48230 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.24■□□□□ 0.99
TM4SF4P48230 RNA5SP416-201ENST00000516838 111 ntBASIC21.24■□□□□ 0.99
TM4SF4P48230 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.24■□□□□ 0.99
TM4SF4P48230 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF4P48230 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TM4SF4P48230 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF4P48230 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.24■□□□□ 0.99
TM4SF4P48230 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.24■□□□□ 0.99
TM4SF4P48230 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.24■□□□□ 0.99
TM4SF4P48230 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF4P48230 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF4P48230 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF4P48230 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF4P48230 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.23■□□□□ 0.99
TM4SF4P48230 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF4P48230 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF4P48230 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.23■□□□□ 0.99
TM4SF4P48230 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.23■□□□□ 0.99
TM4SF4P48230 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TM4SF4P48230 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.23■□□□□ 0.99
TM4SF4P48230 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.23■□□□□ 0.99
TM4SF4P48230 AC008735.5-201ENST00000623544 497 ntBASIC21.23■□□□□ 0.99
TM4SF4P48230 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.23■□□□□ 0.99
TM4SF4P48230 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF4P48230 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF4P48230 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.23■□□□□ 0.99
TM4SF4P48230 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.23■□□□□ 0.99
TM4SF4P48230 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF4P48230 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.23■□□□□ 0.99
TM4SF4P48230 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.23■□□□□ 0.99
TM4SF4P48230 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF4P48230 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF4P48230 KRT18P28-201ENST00000453838 1332 ntBASIC21.23■□□□□ 0.99
TM4SF4P48230 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF4P48230 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF4P48230 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF4P48230 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF4P48230 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF4P48230 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF4P48230 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.22■□□□□ 0.99
TM4SF4P48230 ABCD1P5-201ENST00000445663 754 ntBASIC21.22■□□□□ 0.99
TM4SF4P48230 AP006288.1-201ENST00000446065 395 ntBASIC21.22■□□□□ 0.99
TM4SF4P48230 AC068472.1-201ENST00000474589 881 ntBASIC21.22■□□□□ 0.99
TM4SF4P48230 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.22■□□□□ 0.99
TM4SF4P48230 CFL1-212ENST00000531413 636 ntTSL 3 BASIC21.22■□□□□ 0.99
TM4SF4P48230 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF4P48230 MTDHP5-201ENST00000598980 586 ntBASIC21.22■□□□□ 0.99
TM4SF4P48230 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF4P48230 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TM4SF4P48230 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.22■□□□□ 0.99
TM4SF4P48230 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TM4SF4P48230 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TM4SF4P48230 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF4P48230 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF4P48230 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF4P48230 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF4P48230 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.21■□□□□ 0.99
TM4SF4P48230 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF4P48230 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF4P48230 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF4P48230 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
TM4SF4P48230 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.21■□□□□ 0.99
TM4SF4P48230 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.21■□□□□ 0.99
TM4SF4P48230 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF4P48230 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.21■□□□□ 0.99
TM4SF4P48230 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.21■□□□□ 0.99
TM4SF4P48230 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF4P48230 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.21■□□□□ 0.99
TM4SF4P48230 AC113404.2-201ENST00000507884 177 ntBASIC21.21■□□□□ 0.99
TM4SF4P48230 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.21■□□□□ 0.99
TM4SF4P48230 UNC93B6-202ENST00000528242 690 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms