Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL353692.3-201ENST00000407031 1396 ntBASIC20.94■□□□□ 0.94
HTTP42858 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTTP42858 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTTP42858 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HTTP42858 RPS8P6-201ENST00000426177 609 ntBASIC20.94■□□□□ 0.94
HTTP42858 GUSBP12-201ENST00000513727 720 ntBASIC20.94■□□□□ 0.94
HTTP42858 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.94■□□□□ 0.94
HTTP42858 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTTP42858 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.94■□□□□ 0.94
HTTP42858 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.94■□□□□ 0.94
HTTP42858 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTTP42858 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTTP42858 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.94■□□□□ 0.94
HTTP42858 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
HTTP42858 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HTTP42858 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HTTP42858 AL137060.1-201ENST00000618151 2648 ntBASIC20.94■□□□□ 0.94
HTTP42858 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTTP42858 RPS2P1-201ENST00000434010 821 ntBASIC20.94■□□□□ 0.94
HTTP42858 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HTTP42858 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.94■□□□□ 0.94
HTTP42858 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.94■□□□□ 0.94
HTTP42858 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
HTTP42858 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTTP42858 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HTTP42858 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HTTP42858 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HTTP42858 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.94■□□□□ 0.94
HTTP42858 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.93■□□□□ 0.94
HTTP42858 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTTP42858 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTTP42858 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HTTP42858 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HTTP42858 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.93■□□□□ 0.94
HTTP42858 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HTTP42858 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HTTP42858 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTTP42858 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HTTP42858 HLA-J-203ENST00000494367 1087 ntBASIC20.93■□□□□ 0.94
HTTP42858 AC040169.1-201ENST00000565382 521 ntBASIC20.93■□□□□ 0.94
HTTP42858 MIR3687-2-201ENST00000577708 61 ntBASIC20.93■□□□□ 0.94
HTTP42858 MIR3687-1-201ENST00000614492 61 ntBASIC20.93■□□□□ 0.94
HTTP42858 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.93■□□□□ 0.94
HTTP42858 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.93■□□□□ 0.94
HTTP42858 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HTTP42858 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTTP42858 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTTP42858 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HTTP42858 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTTP42858 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTTP42858 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.92■□□□□ 0.94
HTTP42858 LINC01521-201ENST00000504184 1943 ntBASIC20.92■□□□□ 0.94
HTTP42858 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.92■□□□□ 0.94
HTTP42858 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTTP42858 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTTP42858 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.92■□□□□ 0.94
HTTP42858 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.92■□□□□ 0.94
HTTP42858 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.92■□□□□ 0.94
HTTP42858 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HTTP42858 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTTP42858 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HTTP42858 PCDHAC2-203ENST00000615316 3011 ntBASIC20.91■□□□□ 0.94
HTTP42858 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.91■□□□□ 0.94
HTTP42858 RNA5SP415-201ENST00000517246 115 ntBASIC20.91■□□□□ 0.94
HTTP42858 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.91■□□□□ 0.94
HTTP42858 AC083906.6-201ENST00000641366 219 ntBASIC20.91■□□□□ 0.94
HTTP42858 AC079781.4-201ENST00000641908 219 ntBASIC20.91■□□□□ 0.94
HTTP42858 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HTTP42858 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.91■□□□□ 0.94
HTTP42858 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.91■□□□□ 0.94
HTTP42858 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.91■□□□□ 0.94
HTTP42858 AC002347.1-201ENST00000569543 541 ntBASIC20.91■□□□□ 0.94
HTTP42858 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
HTTP42858 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
HTTP42858 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HTTP42858 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.91■□□□□ 0.94
HTTP42858 RPS2P28-201ENST00000314255 741 ntBASIC20.91■□□□□ 0.94
HTTP42858 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HTTP42858 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
HTTP42858 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.91■□□□□ 0.94
HTTP42858 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.91■□□□□ 0.94
HTTP42858 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.91■□□□□ 0.94
HTTP42858 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HTTP42858 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.9■□□□□ 0.94
HTTP42858 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HTTP42858 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HTTP42858 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HTTP42858 SPCS2P1-201ENST00000561636 679 ntBASIC20.9■□□□□ 0.94
HTTP42858 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HTTP42858 Z83851.2-201ENST00000609564 659 ntBASIC20.9■□□□□ 0.94
HTTP42858 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.9■□□□□ 0.94
HTTP42858 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.9■□□□□ 0.94
HTTP42858 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.9■□□□□ 0.94
HTTP42858 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HTTP42858 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
HTTP42858 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.9■□□□□ 0.94
HTTP42858 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.9■□□□□ 0.94
HTTP42858 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HTTP42858 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.9■□□□□ 0.94
HTTP42858 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms