Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC3P40938 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC3P40938 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RFC3P40938 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC3P40938 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC3P40938 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC3P40938 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RFC3P40938 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC3P40938 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.06■□□□□ 0.32
RFC3P40938 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC3P40938 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.06■□□□□ 0.32
RFC3P40938 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.06■□□□□ 0.32
RFC3P40938 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.06■□□□□ 0.32
RFC3P40938 AC092597.1-201ENST00000487352 616 ntBASIC17.06■□□□□ 0.32
RFC3P40938 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC3P40938 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.06■□□□□ 0.32
RFC3P40938 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.06■□□□□ 0.32
RFC3P40938 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.06■□□□□ 0.32
RFC3P40938 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFC3P40938 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.06■□□□□ 0.32
RFC3P40938 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC3P40938 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC3P40938 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC3P40938 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.06■□□□□ 0.32
RFC3P40938 AL512353.2-201ENST00000448759 1962 ntBASIC17.06■□□□□ 0.32
RFC3P40938 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFC3P40938 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC3P40938 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC3P40938 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC3P40938 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.06■□□□□ 0.32
RFC3P40938 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC3P40938 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC3P40938 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.05■□□□□ 0.32
RFC3P40938 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.05■□□□□ 0.32
RFC3P40938 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC3P40938 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.05■□□□□ 0.32
RFC3P40938 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
RFC3P40938 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.05■□□□□ 0.32
RFC3P40938 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC3P40938 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC3P40938 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFC3P40938 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFC3P40938 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC3P40938 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.05■□□□□ 0.32
RFC3P40938 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.05■□□□□ 0.32
RFC3P40938 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.05■□□□□ 0.32
RFC3P40938 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.05■□□□□ 0.32
RFC3P40938 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC3P40938 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFC3P40938 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.05■□□□□ 0.32
RFC3P40938 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFC3P40938 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.05■□□□□ 0.32
RFC3P40938 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFC3P40938 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.05■□□□□ 0.32
RFC3P40938 ZNF444P1-201ENST00000559497 298 ntBASIC17.05■□□□□ 0.32
RFC3P40938 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.05■□□□□ 0.32
RFC3P40938 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.05■□□□□ 0.32
RFC3P40938 HYMAI.1-201ENST00000620949 238 ntBASIC17.05■□□□□ 0.32
RFC3P40938 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.05■□□□□ 0.32
RFC3P40938 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC3P40938 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFC3P40938 AC141586.3-201ENST00000562166 1838 ntBASIC17.05■□□□□ 0.32
RFC3P40938 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.05■□□□□ 0.32
RFC3P40938 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC3P40938 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC3P40938 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC3P40938 FEM1AP3-201ENST00000403722 1741 ntBASIC17.04■□□□□ 0.32
RFC3P40938 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.04■□□□□ 0.32
RFC3P40938 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RFC3P40938 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
RFC3P40938 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RFC3P40938 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC3P40938 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFC3P40938 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RFC3P40938 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC3P40938 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFC3P40938 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFC3P40938 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RFC3P40938 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFC3P40938 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFC3P40938 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.04■□□□□ 0.32
RFC3P40938 RASA4DP-201ENST00000460726 1199 ntBASIC17.04■□□□□ 0.32
RFC3P40938 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.04■□□□□ 0.32
RFC3P40938 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFC3P40938 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RFC3P40938 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC3P40938 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC3P40938 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC3P40938 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.04■□□□□ 0.32
RFC3P40938 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.04■□□□□ 0.32
RFC3P40938 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.04■□□□□ 0.32
RFC3P40938 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC3P40938 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.04■□□□□ 0.32
RFC3P40938 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFC3P40938 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.03■□□□□ 0.32
RFC3P40938 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.03■□□□□ 0.32
RFC3P40938 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC3P40938 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC3P40938 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.03■□□□□ 0.32
RFC3P40938 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms