Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21■□□□□ 0.95
CTGFP29279 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTGFP29279 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTGFP29279 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CTGFP29279 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CTGFP29279 NMU-202ENST00000505262 693 ntTSL 3 BASIC21■□□□□ 0.95
CTGFP29279 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21■□□□□ 0.95
CTGFP29279 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21■□□□□ 0.95
CTGFP29279 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTGFP29279 CD63-204ENST00000546939 779 ntTSL 3 BASIC21■□□□□ 0.95
CTGFP29279 AC034105.1-201ENST00000563488 319 ntBASIC21■□□□□ 0.95
CTGFP29279 AP001160.2-201ENST00000596071 487 ntBASIC21■□□□□ 0.95
CTGFP29279 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21■□□□□ 0.95
CTGFP29279 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21■□□□□ 0.95
CTGFP29279 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTGFP29279 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CTGFP29279 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21■□□□□ 0.95
CTGFP29279 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTGFP29279 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CTGFP29279 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.99■□□□□ 0.95
CTGFP29279 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTGFP29279 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTGFP29279 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTGFP29279 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTGFP29279 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTGFP29279 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
CTGFP29279 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.99■□□□□ 0.95
CTGFP29279 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.99■□□□□ 0.95
CTGFP29279 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTGFP29279 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.99■□□□□ 0.95
CTGFP29279 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTGFP29279 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.99■□□□□ 0.95
CTGFP29279 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTGFP29279 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTGFP29279 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTGFP29279 TP73-AS1-210ENST00000637775 1455 ntBASIC20.99■□□□□ 0.95
CTGFP29279 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CTGFP29279 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTGFP29279 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTGFP29279 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTGFP29279 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTGFP29279 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTGFP29279 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.98■□□□□ 0.95
CTGFP29279 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CTGFP29279 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTGFP29279 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CTGFP29279 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTGFP29279 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.98■□□□□ 0.95
CTGFP29279 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTGFP29279 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.98■□□□□ 0.95
CTGFP29279 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.98■□□□□ 0.95
CTGFP29279 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.98■□□□□ 0.95
CTGFP29279 AC098831.1-202ENST00000438821 336 ntBASIC20.98■□□□□ 0.95
CTGFP29279 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.98■□□□□ 0.95
CTGFP29279 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.98■□□□□ 0.95
CTGFP29279 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.98■□□□□ 0.95
CTGFP29279 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.98■□□□□ 0.95
CTGFP29279 AC021087.4-201ENST00000563761 564 ntBASIC20.98■□□□□ 0.95
CTGFP29279 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTGFP29279 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.98■□□□□ 0.95
CTGFP29279 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.98■□□□□ 0.95
CTGFP29279 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTGFP29279 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTGFP29279 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTGFP29279 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CTGFP29279 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTGFP29279 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTGFP29279 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTGFP29279 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTGFP29279 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTGFP29279 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTGFP29279 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CTGFP29279 GPX1P2-201ENST00000429271 606 ntBASIC20.97■□□□□ 0.95
CTGFP29279 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTGFP29279 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.97■□□□□ 0.95
CTGFP29279 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CTGFP29279 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.97■□□□□ 0.95
CTGFP29279 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.97■□□□□ 0.95
CTGFP29279 AC012640.2-201ENST00000561606 901 ntBASIC20.97■□□□□ 0.95
CTGFP29279 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CTGFP29279 AC027601.4-201ENST00000611259 610 ntBASIC20.97■□□□□ 0.95
CTGFP29279 FEM1AP3-201ENST00000403722 1741 ntBASIC20.97■□□□□ 0.95
CTGFP29279 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTGFP29279 AL137060.1-201ENST00000618151 2648 ntBASIC20.97■□□□□ 0.95
CTGFP29279 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTGFP29279 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTGFP29279 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTGFP29279 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.96■□□□□ 0.95
CTGFP29279 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTGFP29279 KRT8P50-201ENST00000562022 1438 ntBASIC20.96■□□□□ 0.95
CTGFP29279 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTGFP29279 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTGFP29279 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.96■□□□□ 0.95
CTGFP29279 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTGFP29279 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTGFP29279 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTGFP29279 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CTGFP29279 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTGFP29279 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.96■□□□□ 0.95
CTGFP29279 RBM17P3-201ENST00000417687 1192 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms