Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
NR4A1P22736 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.31■□□□□ 0.36
NR4A1P22736 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A1P22736 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A1P22736 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.31■□□□□ 0.36
NR4A1P22736 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A1P22736 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.31■□□□□ 0.36
NR4A1P22736 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A1P22736 ITM2C-210ENST00000620962 501 ntBASIC17.31■□□□□ 0.36
NR4A1P22736 AC006557.6-201ENST00000623071 864 ntBASIC17.31■□□□□ 0.36
NR4A1P22736 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A1P22736 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A1P22736 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A1P22736 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A1P22736 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A1P22736 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.31■□□□□ 0.36
NR4A1P22736 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A1P22736 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A1P22736 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A1P22736 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A1P22736 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.31■□□□□ 0.36
NR4A1P22736 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR4A1P22736 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NR4A1P22736 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.3■□□□□ 0.36
NR4A1P22736 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
NR4A1P22736 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NR4A1P22736 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NR4A1P22736 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NR4A1P22736 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.3■□□□□ 0.36
NR4A1P22736 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 HLA-G-202ENST00000376815 851 ntBASIC17.3■□□□□ 0.36
NR4A1P22736 HLA-G-203ENST00000376818 1127 ntBASIC17.3■□□□□ 0.36
NR4A1P22736 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 KRT18P29-201ENST00000397031 1267 ntBASIC17.3■□□□□ 0.36
NR4A1P22736 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.3■□□□□ 0.36
NR4A1P22736 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.3■□□□□ 0.36
NR4A1P22736 AC008687.6-201ENST00000596318 630 ntBASIC17.3■□□□□ 0.36
NR4A1P22736 AC006058.3-201ENST00000606217 1069 ntBASIC17.3■□□□□ 0.36
NR4A1P22736 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.3■□□□□ 0.36
NR4A1P22736 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NR4A1P22736 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.3■□□□□ 0.36
NR4A1P22736 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.3■□□□□ 0.36
NR4A1P22736 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NR4A1P22736 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.3■□□□□ 0.36
NR4A1P22736 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.3■□□□□ 0.36
NR4A1P22736 AC084018.2-201ENST00000613093 2607 ntBASIC17.3■□□□□ 0.36
NR4A1P22736 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR4A1P22736 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.29■□□□□ 0.36
NR4A1P22736 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR4A1P22736 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR4A1P22736 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
NR4A1P22736 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR4A1P22736 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR4A1P22736 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR4A1P22736 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR4A1P22736 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.29■□□□□ 0.36
NR4A1P22736 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.29■□□□□ 0.36
NR4A1P22736 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR4A1P22736 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.29■□□□□ 0.36
NR4A1P22736 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR4A1P22736 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.29■□□□□ 0.36
NR4A1P22736 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR4A1P22736 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.29■□□□□ 0.36
NR4A1P22736 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR4A1P22736 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR4A1P22736 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NR4A1P22736 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NR4A1P22736 KRT17P3-201ENST00000420566 1262 ntBASIC17.29■□□□□ 0.36
NR4A1P22736 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NR4A1P22736 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.29■□□□□ 0.36
NR4A1P22736 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.29■□□□□ 0.36
NR4A1P22736 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.29■□□□□ 0.36
NR4A1P22736 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NR4A1P22736 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms